Protein

View in Explore
Genbank accession
CAM0075655.1 [GenBank]
Protein name
internal virion protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAAIKLFTFKGEVTSYAPHLLPNEAATVAKDCHFDGGKLNPIMESLDTGDTVPGDTGTLFRYEDQYWFSWVGDVDAIKSPIARDSWRRVYWTDGDYPKVTYNTIFNGSGRLPLASYRLGIPSPANSPGITYFTPAVDPEEEVTIFYVLTYSSAVGEEGMPGPVSIEINCFPVGIKQDQQGGANEIGKVTLSLQPPGTNNSNINTINIYRTTATAGASEFLKVASVPIATPSYTDSIPDYSLTNILETENFSMPPEEMKGLCVMANGICAGFVENEILFSEAYLPYAWPEDYRLSIEEDVVAIEPIGTSLVVGTTGDPYLFSGVSPGNIASQRLEISQACSSKLSMCNIGMAVVYACPDGLVGIAPDGVMMMTNGIISPRQWRELVDPSTIKAFRYEGKYVATHSKGAFIFDPITKDFRQLSASFSVGYTDARDESLYYIVAGKVFKFQGGQNSLELTWRSKEFVNISKSFSCVRIDADDINLVSFKYFVDGNEVLSRDKGQVKTTFTLPSVRGDSCQFELSSNSNIQTIRVATSKQELKE
Physico‐chemical
properties
protein length:540 AA
molecular weight: 59166,04420 Da
isoelectric point:4,69731
aromaticity:0,10741
hydropathy:-0,13852

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0075655.1
1 540
Domain Start End Length (AA) Confidence
N-terminal 1 423 423 0,9132
Central domain 424 529 107 0,0128
C-terminal 530 540 10 0,9910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-423
Central
424-529
C-terminal
530-540

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D205
[NCBI] 		3104962 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0075655.1 [NCBI]
Genbank nucleotide accession
OZ196611 [NCBI]
CDS location
range 12766 -> 14388
strand +
CDS
ATGGCTGCAATTAAGTTATTCACATTTAAAGGAGAGGTGACGTCATACGCACCTCATTTGCTGCCTAATGAAGCGGCTACAGTGGCGAAGGATTGCCACTTTGATGGCGGCAAGCTTAACCCAATCATGGAAAGTCTAGATACTGGCGACACCGTTCCGGGTGACACTGGCACATTATTCCGTTATGAAGATCAGTATTGGTTCTCTTGGGTTGGTGATGTCGACGCAATTAAAAGCCCTATCGCTCGAGACTCTTGGCGTCGTGTGTATTGGACTGACGGCGATTATCCAAAAGTAACTTATAACACAATATTTAATGGCTCTGGTAGGCTGCCTTTAGCAAGCTATAGACTTGGAATCCCCTCTCCTGCAAACTCACCAGGTATAACCTATTTCACTCCTGCGGTAGATCCGGAGGAAGAGGTAACTATTTTTTATGTACTTACCTATAGTTCCGCAGTAGGTGAAGAGGGAATGCCGGGGCCGGTATCAATAGAGATTAATTGTTTTCCAGTTGGCATAAAGCAAGATCAACAAGGCGGGGCTAATGAGATTGGAAAGGTTACTTTATCTCTTCAACCTCCGGGTACAAACAATAGCAATATAAACACTATCAACATATACAGAACAACGGCGACCGCTGGCGCGTCTGAGTTTTTAAAGGTTGCTTCTGTTCCTATTGCTACGCCTTCTTATACCGATTCAATACCAGATTACTCGCTAACCAATATTCTAGAGACGGAAAATTTCTCAATGCCACCTGAAGAAATGAAAGGTCTTTGCGTTATGGCTAACGGAATATGTGCCGGGTTCGTAGAGAATGAGATTTTGTTTTCTGAGGCTTATCTTCCTTACGCCTGGCCAGAAGATTACCGACTATCAATAGAAGAGGATGTGGTAGCGATCGAGCCTATTGGCACTAGCTTGGTTGTTGGGACCACTGGCGATCCTTATCTATTTAGCGGTGTAAGCCCTGGCAACATTGCCAGCCAAAGGCTAGAAATATCTCAAGCGTGTTCTTCTAAGTTATCGATGTGCAATATAGGCATGGCGGTTGTGTACGCTTGCCCTGACGGTTTAGTGGGTATTGCACCCGACGGCGTAATGATGATGACTAACGGTATTATCAGCCCTAGACAATGGCGTGAGCTTGTAGATCCTTCCACTATCAAAGCATTCCGCTATGAAGGTAAGTACGTTGCCACACACAGTAAGGGCGCGTTTATATTCGATCCTATTACCAAAGACTTTAGACAGCTATCTGCAAGCTTTAGTGTTGGTTACACGGACGCACGCGACGAGAGTTTATATTATATCGTTGCTGGCAAAGTTTTTAAGTTTCAAGGCGGTCAAAATAGCCTAGAGCTTACTTGGCGATCGAAAGAGTTCGTGAATATTTCAAAGTCGTTTTCATGCGTTCGCATTGATGCCGACGATATTAACCTAGTGTCTTTCAAATATTTCGTTGATGGCAATGAAGTATTAAGCAGAGATAAAGGGCAAGTTAAAACAACCTTCACGCTTCCGTCAGTTCGTGGTGATAGCTGTCAATTCGAGTTATCATCTAATAGTAATATTCAGACTATTAGAGTTGCTACGTCAAAGCAGGAGCTTAAAGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc3ec8ff9b9d0b87409a101da34a661da6dbc24c76de3bf8bc343cf81e17bd35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50