Protein

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Genbank accession
XWX34397.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MDFKQVFLYDGTPYLAFRGSDGEYDYPNDEWTETPPPEGLYEPIYFNGNEWKGASKEEWEKSIQKKKEEELSKLPPYEPTPIERLAATSQLQTAKTARRLQTLEQTQAKSLVNDAEKDRKIKVLEEQVARLMLELTKKGSVE
Physico‐chemical
properties
protein length:142 AA
molecular weight: 16462,26320 Da
isoelectric point:4,94678
aromaticity:0,09859
hydropathy:-0,99859

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_5
[NCBI] 		2815608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX34397.1 [NCBI]
Genbank nucleotide accession
MZ417339.1 [NCBI]
CDS location
range 23527 -> 23955
strand -
CDS
ATGGATTTTAAACAAGTTTTTTTATATGATGGAACACCATATTTAGCATTTCGTGGCTCCGATGGGGAATATGATTATCCTAATGACGAGTGGACAGAAACTCCACCACCAGAAGGATTATATGAGCCTATATATTTTAATGGGAATGAGTGGAAAGGTGCAAGTAAAGAAGAATGGGAAAAGTCTATACAAAAGAAGAAGGAAGAAGAGTTATCTAAACTTCCACCGTATGAACCAACACCTATAGAACGTTTAGCTGCAACGTCACAGTTACAAACTGCTAAAACAGCAAGAAGACTACAGACATTGGAACAGACACAAGCAAAAAGTTTAGTCAACGATGCTGAAAAAGACAGAAAGATAAAAGTTTTAGAAGAGCAAGTGGCTAGATTAATGCTTGAATTAACTAAAAAAGGAAGTGTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec412dd7a51a966c8008a34eb2f83185dfd28f805bc7345ec2a5658619bf6d17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8654
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank