Protein

View in Explore
Genbank accession
QPZ53254.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYETGVASSHLDLWDKLRTFLTTNPALVAAGQNWSVAWQAGAGATNPTDMVLSGPGMAGADQVFVGLRRVDAPLVQSFHFRMVGMTGVNPGGVSYTDHVNVSDSVVMYVDQNPMKYWFVANGRRFVVVVKVSTVYETLYGGMLLPYSDPISYPYPMIIGGSAGSAFDQTYNWTNTQLSHSHFITPYGDSASAPNTKPSLLFLDPSGQWIPVDNKALTSTSQGAGVAPYHWLGGMDVTLGSSYHSYYQSLFEKTLACLGGSYALFPVTLVQKAPADQTYGVFHGVYHVTGNGNAAENIITLDGVDHLVIQNVFRTTPNSYWALALE
Physico‐chemical
properties
protein length:326 AA
molecular weight: 35262,28980 Da
isoelectric point:5,59105
aromaticity:0,12270
hydropathy:0,01902

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPZ53254.1
1 326
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4143
Central domain 11 203 194 0,0021
C-terminal 204 326 122 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-203
C-terminal
204-326

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AchrS_AchV4
[NCBI] 		2796514 Uroviricota > Caudoviricetes > Casjensviridae > Gediminasvirus AchV4 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53254.1 [NCBI]
Genbank nucleotide accession
MW269554 [NCBI]
CDS location
range 15704 -> 16684
strand +
CDS
ATGGCATACGAAACTGGCGTGGCGAGCAGCCACCTCGACTTGTGGGACAAACTGAGGACCTTCCTGACCACCAACCCGGCGCTGGTCGCTGCTGGGCAGAATTGGAGCGTGGCCTGGCAGGCTGGGGCCGGCGCCACGAACCCCACCGACATGGTGCTGTCGGGTCCCGGCATGGCTGGCGCGGATCAGGTGTTCGTCGGTTTGCGCCGTGTCGACGCGCCGCTGGTGCAATCCTTCCATTTCCGCATGGTCGGCATGACCGGCGTGAACCCGGGTGGCGTGAGCTACACCGATCACGTCAATGTGTCCGACAGTGTGGTGATGTACGTCGACCAGAACCCGATGAAATACTGGTTTGTCGCAAACGGCCGCCGCTTCGTTGTCGTGGTCAAGGTCAGCACGGTCTACGAAACGCTGTATGGGGGAATGCTCCTCCCGTACAGCGACCCAATCTCGTACCCGTATCCCATGATTATCGGCGGCTCTGCGGGTAGCGCGTTTGACCAGACCTACAACTGGACCAACACGCAGCTTTCGCACTCGCATTTCATCACGCCCTACGGCGACTCTGCCTCGGCCCCGAACACGAAGCCCTCGCTGCTGTTCCTCGACCCTTCCGGTCAATGGATTCCGGTCGACAACAAAGCCCTGACCAGCACTTCGCAAGGGGCCGGCGTCGCGCCGTATCATTGGCTTGGCGGGATGGATGTGACCCTGGGCAGCTCGTACCACTCCTACTATCAGTCCCTGTTCGAGAAAACCCTGGCGTGCCTCGGCGGAAGTTATGCGCTGTTCCCGGTGACCCTGGTGCAGAAGGCGCCTGCTGACCAGACCTACGGCGTCTTCCATGGCGTCTATCATGTCACCGGCAACGGCAACGCGGCCGAAAACATCATCACCCTGGATGGCGTCGATCACCTTGTCATTCAGAACGTGTTCCGCACGACGCCGAACTCGTACTGGGCTTTGGCCCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1c7d47c9d07c07463351996401d2f5de6c2c4b3e59b0523d36a4a842cfdb2ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Achromobacter phage vB_AchrS_AchV4 Kaliniene,L., Noreika,A. and Meskys,R. 2020-08-14 — GenBank