Protein
View in Explore- Genbank accession
- CAH1085062.1 [GenBank]
- Protein name
- molybdenum ABC transporter permease
- RBP type
-
TSP
- Protein sequence
-
MMFSLTPEELSVLQLSCKVAASCLVVSIIPAICVGWFLARKDFWGKSLIETLVFLPLVLPPVVPGYLLLQVFGSRGIIGQYLAPLGINFAFNWKGAVLASAVMGFPLLVQSIRLAIELVDQRLEMAAKTLGASSLGAFFHVTLPLASSGILIGAILCFCRSLGEFGATITFVGNISNETRTLPLAMYSLMQQPDTEAAIQRLIVLSLSVAFLALWFAQWFHRYQKKRLGR
- Physico‐chemical
properties -
protein length: 230 AA molecular weight: 25153,77310 Da isoelectric point: 9,27134 aromaticity: 0,10870 hydropathy: 0,78739
Domains
Domains [InterPro]
IPR035906
STR
3–226
STR
3–226
NF006939
Unmapped
3–229
Unmapped
3–229
PTHR30183
Unmapped
4–227
Unmapped
4–227
IPR035906
STR
7–220
STR
7–220
IPR000515
STR
13–215
STR
13–215
IPR000515
STR
13–209
STR
13–209
IPR011867
Unmapped
15–215
Unmapped
15–215
IPR000515
STR
31–222
STR
31–222
1
230
Architecture
STR 3-226 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
230
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 37 | 37 | 0,8146 |
| Central domain | 38 | 219 | 183 | 0,0339 |
| C-terminal | 220 | 230 | 10 | 0,9921 |
Note: Constraints were applied during segmentation.
Fixed 6 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 6 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-37
1-37
Central
38-219
38-219
C-terminal
220-230
220-230
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1085062.1
[NCBI]
Genbank nucleotide accession
CAKLQF020000010
[NCBI]
CDS location
range 99659 -> 100351
strand +
strand +
CDS
ATGATGTTTTCTTTAACCCCAGAAGAGCTCAGTGTACTGCAACTTTCTTGTAAGGTGGCAGCGAGTTGTCTTGTGGTCAGTATTATTCCTGCAATTTGTGTGGGGTGGTTTTTGGCTCGTAAAGACTTTTGGGGTAAGTCACTCATTGAAACATTGGTGTTTTTACCTTTAGTGCTACCGCCAGTGGTTCCTGGTTATTTGCTTTTACAAGTTTTTGGGAGCCGCGGCATTATTGGGCAATATTTGGCGCCACTCGGAATTAATTTTGCATTTAACTGGAAAGGCGCCGTTCTTGCTTCGGCAGTGATGGGTTTTCCACTATTAGTGCAATCTATTCGTCTAGCGATTGAACTGGTCGATCAGCGTTTAGAAATGGCAGCAAAGACATTAGGAGCTTCATCTTTAGGGGCATTTTTTCACGTCACTTTGCCTCTTGCCAGCAGTGGCATTTTAATTGGCGCTATTTTGTGTTTTTGCCGCAGTTTAGGAGAGTTTGGGGCCACCATTACTTTTGTGGGTAATATTTCAAATGAAACACGGACTTTGCCTCTAGCCATGTATAGCTTAATGCAACAACCCGATACAGAAGCTGCTATTCAAAGGCTTATTGTTTTATCGTTAAGTGTAGCTTTTCTGGCATTATGGTTTGCCCAGTGGTTTCATCGTTATCAAAAGAAGCGTTTAGGGCGGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
5f642d0e16d2c42ffaabf38a26d7aa5af2eb3203f15dbe3f70578195669b709d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50