Protein

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Genbank accession
QKN86878.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MREADFDLIFAKKAPLTRELSDEQYEKGWYYLGDTAPDKRDFDSVMRYMDEKIKKLSTMVSAAVEAVGNAIPVGAPLAWPSDTAPDGWALMIGQTFDKVKYPLLAKVYPSGVLPDMRGRVIKAKPDGRAVLSLEEDQVKSHTHTGKAATAGGTRATSTFDHGNKRTTTNGNHTHGSPQGARHGGSGQYTSGDDETNSVFNWPATSAAGDHFHDVQIGPHNHNVDINHEHTLQIDATGGTENTVKNIAMNYIVRLA
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27759,52580 Da
isoelectric point:6,16245
aromaticity:0,07451
hydropathy:-0,60667

Domains

Domains [InterPro]
DC_0310
STR
25–255
DC_0310
IPR051934
Unmapped
62–255
IPR051934
SSF88874
STR
67–254
SSF88874
IPR037053
ATT
69–123
IPR037053
IPR011083
ATT
74–121
IPR011083
QKN86878.1
1 255
Architecture
STR
ATT
STR
STR 25-68 | ATT 69-123 | STR 124-255
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_526-1
[NCBI] 		2736215 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN86878.1 [NCBI]
Genbank nucleotide accession
MT366937.1 [NCBI]
CDS location
range 41454 -> 42221
strand +
CDS
ATGAGAGAAGCAGATTTTGATTTAATTTTCGCAAAGAAAGCGCCGCTAACTCGCGAATTGAGTGACGAGCAATACGAAAAAGGCTGGTACTACTTAGGCGACACAGCGCCGGATAAGCGGGATTTTGATAGCGTTATGCGCTACATGGACGAGAAGATCAAGAAACTGTCAACAATGGTAAGCGCGGCGGTTGAGGCGGTAGGTAATGCAATTCCTGTAGGTGCTCCGCTTGCTTGGCCTAGCGACACAGCGCCTGACGGCTGGGCGCTAATGATTGGTCAGACTTTCGACAAGGTGAAATATCCGCTACTGGCTAAGGTGTATCCGTCCGGAGTATTGCCAGACATGCGCGGCAGGGTAATCAAGGCAAAACCGGACGGGCGAGCGGTTTTGTCACTTGAAGAAGATCAGGTTAAGAGTCACACCCATACCGGTAAGGCTGCAACGGCTGGCGGCACACGCGCAACGTCAACGTTTGATCATGGCAACAAGCGAACAACCACTAACGGGAATCATACGCACGGTTCGCCACAAGGTGCGCGACATGGTGGTAGCGGTCAATATACGTCTGGTGATGATGAAACAAACAGCGTGTTTAATTGGCCTGCAACCTCGGCAGCTGGCGACCACTTCCATGATGTGCAAATCGGCCCACACAACCATAATGTAGACATTAATCATGAACATACGTTGCAGATTGACGCTACTGGCGGCACTGAAAACACGGTTAAAAACATTGCGATGAACTACATTGTTCGTCTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c30e11f298e63a5662f12d492aa9b8e89600961f265db45e80b7a4c9f99519e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequences of Yersinia phage genomes Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank