Protein

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Genbank accession
XQQ56049.1 [GenBank]
Protein name
PAAR motif of membrane protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MPAVTRLGDIALGHSCYPPSPTIEASSNVFANSIAVHRLGDKIQPHACPDTAPHGRNSSSGSTSVFTNSKATCGIGDAVNCGGIIAQASNNVFRG
Physico‐chemical
properties
protein length:95 AA
molecular weight: 9650,65160 Da
isoelectric point:7,73865
aromaticity:0,04211
hydropathy:-0,10211

Domains

Domains [InterPro]
cd14737
STR
2–95
cd14737
G3DSA:2.60.200.60
STR
3–94
G3DSA:2.60.200.60
IPR008727
STR
13–86
IPR008727
XQQ56049.1
1 95
Architecture
STR
STR 2-95
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQQ56049.1
1 95
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,0708
Central domain 55 84 31 0,0027
C-terminal 85 95 10 0,9884
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-84
C-terminal
85-95

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage PT14_12670_16
[NCBI] 		3410872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ56049.1 [NCBI]
Genbank nucleotide accession
PV052266 [NCBI]
CDS location
range 130949 -> 131236
strand -
CDS
ATGCCAGCAGTAACTAGATTAGGAGATATAGCATTAGGACATAGTTGTTATCCACCTTCTCCTACAATAGAAGCAAGTTCTAATGTTTTTGCAAATTCAATAGCTGTTCATAGATTAGGTGATAAAATACAACCACACGCATGTCCTGACACAGCACCTCATGGTAGAAATAGTTCAAGTGGTAGCACAAGTGTTTTTACAAATTCAAAAGCTACTTGTGGTATAGGGGATGCGGTTAATTGTGGAGGTATAATCGCTCAAGCGAGTAATAATGTTTTTAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ffdaaa6ec7f87da81ddd7ec9943d4faa1b4dadb1a6d60f3c881ad0cc8ae09b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Campylobacter and Salmonella phages isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Clarke,M., Wang,B., Connerton,P. and Bhandare,S.G. 2021-12-15 — GenBank