Protein

View in Explore
Genbank accession
XLM52761.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIYDLGTASLAANGEVTGVGTTWKAPLTLIRVGATIIFKTSPLKIYTISEIISDTQINVYNPNSETVPSGTGYAILAHDGITVQGLAQDVAETLRYYQSKETSIEGLLQFIGQDTFDWPLFEQLAKQSTTGAAEALASQIAAEESAATAISARDTTTAARDQTIKAINNAGDAGTLVTLAGYGLATDTTPLISNFDWQEFVFKSGGLYMVNVSSMINAPNDIISTFGTSIAALCIQVISKSSNTTTHSLRVVGQSSTSNQYSREIYIQFVGAPGSRVYAPGREMVMVEAGKSGGGATASRARNLLDVYSKNETFQKSLNFSDVANKSEARTNLDVYSKNETFQKSLNFSDVANKSAARTNLDVYSKPEVNALLTHVDIKKDFGAVGDGVTDDTQALLAAVEASRNNAIAIHIPKGNYLTSQPLNFLRPATIIGEKGARISLTSGPHDYVIQMDHRDVNLDYWAYNSYMSNIIVDGNGYASDGFSLRGVISSCFDNLMATNIRRAGLHCWWTQLCVHNNFVCSGNVETFTTTPTYGILIDAEAGAVNFRGTSADLFINPTCEHVTESGIEATFCSNTTFIGGTSEGNKYGFSFGHESDLGITAVTNTVIGCDLEVNSGGDVVLRKTATGNLFNGLKSGFQSPSIQVNGARANRFVGGSASGFDFYNGASGNHVEGTILFGQHATVIDDSKLNSWEALYNINTGLYTDSSNPVQKRVQLSGGSILFNPLRTSLATVVIDSSPVVIDVQDNARDAQRIDFIIYNLSGGRRPSVSFSNKFRVGSFTTPSEGRQIGMSFVYDAKFSRWTCVGISPDVNIY
Physico‐chemical
properties
protein length:816 AA
molecular weight: 87538,57690 Da
isoelectric point:5,25155
aromaticity:0,09069
hydropathy:-0,10319

Domains

Domains [InterPro]
DC_0313
STR
1–799
DC_0313
IPR012334
STR
377–751
IPR012334
IPR024535
ENZ
381–455
IPR024535
IPR011050
STR
381–687
IPR011050
XLM52761.1
1 816
Architecture
STR
STR 1-799 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLM52761.1
1 816
Domain Start End Length (AA) Confidence
N-terminal 1 393 393 0,9604
Central domain 394 701 309 0,9894
C-terminal 702 816 114 0,9697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-393
Central
394-701
C-terminal
702-816

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_ecoS_OzMSK
[NCBI] 		3385022 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM52761.1 [NCBI]
Genbank nucleotide accession
PQ659294 [NCBI]
CDS location
range 28848 -> 31298
strand -
CDS
ATGGCAATTTATGACTTAGGAACAGCGTCGCTGGCCGCAAATGGCGAGGTAACTGGCGTGGGTACAACATGGAAAGCACCGCTTACACTTATTCGCGTAGGTGCAACCATTATTTTTAAAACCAGCCCCCTGAAGATTTATACCATCTCTGAAATCATCAGCGATACTCAGATTAATGTTTACAACCCTAACTCTGAAACTGTTCCTTCCGGAACTGGTTATGCAATTCTTGCGCACGATGGAATTACCGTTCAGGGGTTGGCTCAGGATGTAGCAGAGACTTTGCGTTACTACCAGTCAAAGGAGACATCAATCGAAGGATTGTTGCAATTTATTGGTCAAGACACTTTCGACTGGCCTCTCTTCGAGCAGCTTGCAAAACAATCCACCACTGGAGCTGCTGAGGCTCTTGCTAGCCAGATTGCTGCCGAAGAGAGCGCCGCTACTGCTATTAGTGCAAGAGACACGACCACTGCAGCAAGAGATCAGACGATTAAAGCAATTAATAACGCCGGGGATGCCGGAACGTTGGTAACTCTTGCCGGATATGGATTGGCGACAGACACTACGCCATTGATAAGCAATTTTGATTGGCAGGAATTTGTTTTTAAATCCGGTGGCCTTTATATGGTTAACGTTTCATCAATGATAAATGCTCCAAATGACATAATCTCAACATTTGGAACATCAATTGCTGCTTTATGCATTCAGGTAATATCAAAGTCAAGCAATACAACCACGCACTCCTTGCGAGTTGTAGGCCAATCTTCAACAAGCAACCAGTATAGCAGGGAGATTTACATTCAGTTTGTGGGAGCGCCCGGAAGCAGGGTTTATGCACCAGGTAGGGAAATGGTGATGGTTGAGGCTGGCAAGTCCGGAGGTGGAGCTACGGCATCGAGGGCTAGAAACTTACTTGATGTTTATTCAAAAAATGAGACTTTTCAAAAATCATTGAATTTCTCTGATGTTGCAAATAAGTCAGAAGCAAGAACAAATCTTGATGTTTATTCAAAAAATGAGACTTTTCAAAAATCATTGAATTTCTCTGATGTTGCAAATAAGTCAGCAGCAAGAACAAATCTTGATGTTTACTCAAAGCCAGAGGTAAACGCTTTACTTACTCATGTCGATATTAAGAAGGACTTTGGCGCTGTTGGTGATGGTGTAACAGATGATACTCAGGCATTGCTTGCCGCTGTTGAGGCATCTAGAAACAACGCTATTGCTATACATATTCCTAAAGGTAATTATCTTACATCTCAGCCATTAAACTTTCTGAGGCCAGCAACAATTATCGGTGAGAAAGGCGCAAGAATCTCACTAACTAGCGGACCTCATGATTACGTCATCCAAATGGATCATAGGGATGTAAACCTAGATTATTGGGCATACAACTCATATATGAGCAACATCATTGTCGATGGGAATGGGTATGCTAGTGATGGCTTTTCATTAAGGGGTGTCATATCATCATGCTTTGACAACCTAATGGCTACGAACATTAGAAGGGCTGGTTTACACTGCTGGTGGACTCAGCTATGCGTGCATAATAACTTTGTGTGCTCTGGTAACGTTGAGACCTTCACAACGACGCCTACGTACGGCATATTAATTGACGCAGAGGCTGGCGCTGTGAACTTCCGCGGCACATCTGCAGATCTTTTTATTAACCCAACTTGCGAGCATGTAACAGAATCAGGAATTGAGGCTACATTCTGCAGTAATACGACATTTATTGGTGGAACCAGCGAGGGAAATAAGTATGGGTTTTCTTTCGGTCATGAGTCAGACCTAGGCATAACAGCAGTAACTAACACTGTTATTGGTTGCGACCTTGAGGTCAACTCTGGTGGTGACGTCGTTCTTAGGAAGACGGCGACAGGAAACTTGTTCAATGGCCTGAAGTCAGGTTTTCAGTCTCCATCAATTCAAGTTAACGGAGCTAGAGCTAATAGGTTTGTTGGTGGATCAGCTTCTGGTTTTGATTTTTATAATGGAGCTTCAGGAAACCATGTAGAAGGGACTATACTATTTGGGCAGCATGCAACAGTGATTGATGACTCAAAACTGAATTCATGGGAGGCTTTGTATAATATAAACACAGGGTTGTACACGGATTCTTCTAACCCCGTTCAAAAAAGGGTTCAGCTATCTGGTGGTAGTATTCTATTTAACCCACTAAGAACAAGTCTTGCAACCGTTGTAATTGATTCAAGTCCTGTAGTTATTGATGTTCAGGATAACGCAAGAGATGCACAGAGGATAGACTTCATAATTTACAACCTTTCAGGCGGCCGGCGTCCATCCGTTTCATTTAGCAATAAGTTTAGAGTTGGCTCATTCACAACTCCATCTGAGGGGAGACAAATTGGAATGTCATTCGTTTATGATGCCAAGTTCTCGCGCTGGACTTGCGTTGGAATTTCTCCAGATGTAAATATTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b557da9fb7e8ad65edd2063c45411864623bc1fdc03bf3e0d6e492af40635813
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Resolution of a T1-like bacteriophage outbreak by receptor engineering Call,M.E., Black,K.A., Nguyen,J.V., Young,R. and Ramsey,J. — — GenBank