Protein

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Genbank accession
AYJ73804.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MCGLVGFCATTNASDNEIALLKSLLAVDIIRGAHATGLAKIDPVKNEVGIHKRAVDAYDFLADPETKEFLDKGRARIYMGHNRYATMGDKTDHGNAHPFQVDHITMVHNGTVDTWGLHLLDGNDKYNVDSNMLCATIANHGAKKTFEEKFSGAAAVVWWDSKERSLNFIRNEDRPLFMAVTTTGTIVWASEPGMLKVFLERPNAKIRLRSPIAELKAEVLVTIPFTEAGVRKGAEPQTTPVTFLDLPIPESERQTAAWWSRYIGVSDYDDYSRSQGSQAGTKGSQAGSSYGTTGDAYARNTLRINNNLDAAGSTFKHRQLVTFDVVKIEAYANGSEYGTVTGIEREENLLIEAHGINVAKVHGYTVLRGSISNAYFIGQDRDLKVTVEDLAVSCLDPKHRPTPGETTPVLRIGTISSETKSHSKPRVQVGGTSGNTPPANITYPLKVQGHTFNNVHVFRDFVSQGCASCGKIPTAYDQRNRHLTVYEGAKFTGSLDECEFICGECVIENK
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55890,21510 Da
isoelectric point:6,39106
aromaticity:0,08039
hydropathy:-0,35314

Domains

Domains [InterPro]
cd00352
STR
2–198
cd00352 DC_0532
IPR017932
STR
2–226
IPR017932
IPR029055
ATT
2–238
IPR029055
IPR029055
ATT
2–199
IPR029055
IPR029055
ATT
2–240
IPR029055
PF13522
STR
74–191
PF13522
AYJ73804.1
1 510
Architecture
ATT
STR
ATT 2-240 | STR 241-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYJ73804.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,2330
Central domain 133 458 327 0,7020
C-terminal 459 510 51 0,7579
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-458
C-terminal
459-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage SaPL
[NCBI] 		2364194 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYJ73804.1 [NCBI]
Genbank nucleotide accession
MH973725 [NCBI]
CDS location
range 8443 -> 9975
strand +
CDS
ATGTGTGGATTGGTAGGCTTCTGTGCCACAACTAACGCGAGTGATAACGAAATCGCTCTTCTCAAATCCCTCCTGGCCGTGGATATTATCCGTGGTGCTCACGCCACCGGTTTGGCCAAGATCGACCCGGTTAAGAACGAGGTAGGAATTCACAAGCGGGCAGTAGATGCCTACGACTTCCTGGCTGATCCTGAAACCAAGGAGTTCCTGGACAAGGGTCGGGCTCGCATCTACATGGGTCACAACCGTTACGCCACGATGGGCGACAAGACGGACCATGGTAATGCCCACCCCTTCCAGGTAGACCACATCACCATGGTACATAACGGAACCGTAGATACCTGGGGCCTGCACCTGCTGGACGGCAATGATAAGTACAACGTGGATTCCAACATGCTGTGCGCTACCATTGCCAACCACGGTGCCAAGAAGACGTTCGAGGAGAAGTTCTCTGGTGCTGCTGCGGTTGTCTGGTGGGATTCCAAGGAACGTAGCCTGAACTTCATCCGTAACGAGGATCGTCCTCTGTTCATGGCGGTTACCACCACCGGGACCATCGTATGGGCATCGGAGCCTGGGATGCTCAAGGTTTTCCTGGAGCGACCCAATGCTAAGATCCGCCTGCGTTCTCCTATCGCTGAACTGAAGGCCGAAGTCCTGGTAACTATCCCGTTCACGGAGGCCGGAGTGCGAAAGGGTGCAGAACCCCAGACCACTCCGGTCACGTTTCTGGACCTCCCGATTCCCGAAAGCGAAAGGCAAACAGCGGCATGGTGGAGTCGCTACATCGGTGTCTCGGACTACGATGACTACAGCCGAAGCCAAGGCAGCCAAGCGGGAACGAAAGGCAGCCAAGCGGGCTCGTCGTATGGAACGACTGGCGATGCGTACGCAAGGAACACCCTCCGGATCAACAACAACCTCGACGCAGCAGGTAGCACCTTCAAGCACCGGCAACTCGTCACCTTCGATGTTGTCAAGATCGAGGCCTACGCAAACGGAAGCGAATACGGAACTGTCACTGGAATCGAGCGTGAAGAAAACCTTCTCATCGAAGCTCATGGCATCAACGTCGCCAAAGTCCACGGATACACCGTCCTCCGAGGGAGTATCTCCAATGCCTACTTCATCGGCCAAGACCGTGATCTCAAGGTTACTGTCGAGGATCTGGCGGTAAGCTGCCTGGACCCAAAGCATCGGCCGACTCCTGGGGAGACTACCCCAGTGTTGAGGATTGGAACGATCTCATCGGAGACGAAATCCCATTCTAAACCCAGGGTTCAAGTCGGCGGCACCTCGGGGAACACCCCTCCGGCCAACATCACCTACCCCCTGAAGGTGCAAGGCCACACCTTCAACAACGTGCATGTCTTTCGGGACTTCGTGTCCCAGGGATGTGCATCTTGCGGGAAGATCCCAACCGCATATGACCAGCGTAATCGTCATCTGACGGTATACGAAGGTGCCAAGTTCACTGGTAGCCTGGATGAGTGCGAGTTCATCTGTGGTGAGTGTGTAATCGAAAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f7fd2202836dff959186b141d74c9d00c7d72387791b3889450862fb952efb26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Single dose of a virulent bacteriophage vB PaeP-SaPL, rescues bacteremic mice infected with multi drug resistant Pseudomonas aeruginosa Alvi,I.A., Asif,M. and Rehman,S.U. 2020 33259872 GenBank