Protein

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Genbank accession
QEP53508.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGLISQSIKNLKGGISQQPDILRFAEQGSEQINGWSSETEGLQKRAPLVFTKTIAYGDELGRAPLIHLINRDSTEQYYVVFTGSGIRVFDLNGKEYAVSGDMAYVRCDNPRDDLRMVTVADYTFIVNRNTVVQENTDPIYTLREDGDCLINIRGGQYGRTLSIHINGGTQASVRIADGNAPEQVEQTDAQWLVKNLAEQMRKNMGGWTINEGSGYIHVIAPGSDNIRTIETKDGYGNQLMNGVMHSSQSFSKLPIEAPNGYTVRIVGDTSKTSDAFYVQYDATRKVWKEVVGWNVAKGLHNHTMPWALIRQPDGSFKMDMLPWAWRSCGDMDTNPTPSLVGQSINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDKARPYGIGRGIYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFVSVLSANAPSKVFIYKFLYLNEEIAQQSWSHWEFGDNVTVLAADSIGSTMYLLLRNQTHTWMARVNFTKNSIDFPNEPYRIYIDNKIKYTIPQGSYNDDTYSTSIQVNHVYGMSIYRGKIYVVATDGQVIDFEPPLGGWQGGTPLIHLNGNWEGQDVYLGLAIDFRYVFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEQSGAFVVEVENTSRLFRYDMSGARLGSNALRAGTLNVGTGQFRFPVVGNAAMNIVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 88209,12630 Da
isoelectric point:5,80686
aromaticity:0,10872
hydropathy:-0,28066

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
QEP53508.1
1 791
Architecture
TTP
TTP 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEP53508.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9955
Central domain 140 343 205 0,1776
C-terminal 344 791 447 0,2364
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-343
C-terminal
344-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage LPST144
[NCBI] 		2601639 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEP53508.1 [NCBI]
Genbank nucleotide accession
MN252582 [NCBI]
CDS location
range 23691 -> 26066
strand +
CDS
ATGGGACTTATTTCACAATCAATTAAGAACCTCAAGGGAGGTATAAGCCAACAGCCAGACATTCTACGCTTTGCCGAGCAAGGGTCTGAGCAAATCAATGGTTGGTCTTCCGAGACTGAGGGTCTACAGAAACGTGCTCCGCTTGTGTTCACAAAGACCATTGCCTATGGGGATGAGCTAGGCCGAGCACCCCTTATCCATTTAATCAACCGAGATAGCACAGAACAATATTACGTTGTGTTCACTGGAAGTGGAATCCGGGTGTTTGACCTTAATGGTAAAGAGTATGCTGTATCTGGTGATATGGCCTACGTGAGATGTGATAATCCGCGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTCATCGTTAACCGCAACACAGTAGTACAGGAGAACACTGACCCTATCTACACACTCCGTGAGGATGGGGACTGCCTGATTAATATTCGTGGAGGCCAGTATGGTAGAACCTTAAGTATCCACATTAACGGTGGCACACAGGCTTCCGTCAGGATTGCAGATGGTAATGCTCCAGAACAGGTTGAACAGACTGATGCTCAATGGCTCGTAAAGAACCTTGCAGAACAGATGCGTAAGAACATGGGAGGCTGGACTATCAACGAAGGCTCCGGGTATATCCATGTGATTGCTCCGGGTAGTGATAATATCAGAACCATTGAGACCAAAGATGGTTATGGTAATCAGTTGATGAATGGAGTAATGCACTCAAGTCAGTCATTCTCTAAGCTACCAATAGAGGCTCCGAATGGATACACTGTCCGCATCGTTGGGGACACCTCTAAGACTTCTGATGCGTTCTACGTTCAGTACGACGCAACGCGAAAGGTGTGGAAGGAGGTAGTTGGCTGGAACGTCGCAAAGGGTCTCCACAACCATACAATGCCTTGGGCGCTAATTCGTCAACCGGATGGTTCATTCAAGATGGACATGCTTCCGTGGGCTTGGCGCTCTTGTGGTGATATGGACACTAACCCAACACCATCTCTGGTAGGACAATCTATCAACGATGTGTTCTTCTTCCGAAACCGCTTAGGATTCCTCGCTGGTGAGAACATTGTGATGTCCCGCACCTCCAAGTATTTCTCACTGTTCCCTGCGTCAGTTGCTAACCTGTCCGACGATGACCCCATTGACGTTGCCGTGTCTCACAACCGCATCTCAATCCTGAAGTATGCCGTACCGTTCTCTGAAGAGTTGCTGTTATGGTCTGACCAAGCACAGTTCGTTCTATCTGCACAGGGCATCCTCTCGCCGAAGTCAGTAGAGTTGAACCTAACGACCGAGTTTGACGTGTCGGACAAGGCCAGACCGTATGGCATCGGGCGAGGTATTTATTTCGCATCACCCCGCGCTTCCTATACGTCACTGAACCGTTACTATGCGGTACAGGATGTTAGCTCTGTGAAATCTGCTGAGGATATGAGTGCGCACGTCCCAAGCTACATTCCAAACGGTGTGTTCTCTATCCGAGGCTCCGGCACGGAGAACTTCGTGTCCGTTCTGTCTGCCAACGCTCCGAGCAAGGTGTTCATCTACAAGTTCCTCTATTTAAACGAAGAGATAGCACAACAGTCTTGGTCGCATTGGGAGTTCGGGGATAACGTAACGGTTCTGGCGGCAGACTCTATCGGCTCTACCATGTACTTGCTGCTTCGAAACCAGACACATACGTGGATGGCTAGAGTGAACTTTACGAAGAACTCAATTGACTTCCCGAATGAGCCTTACCGTATTTATATCGACAACAAGATTAAGTACACGATTCCACAAGGAAGCTATAACGACGATACATACAGTACGTCAATCCAAGTAAACCATGTATATGGCATGAGCATTTATCGCGGAAAGATTTACGTTGTTGCGACAGATGGTCAGGTTATAGACTTTGAGCCTCCACTCGGTGGTTGGCAAGGAGGAACACCACTGATACACCTTAATGGTAATTGGGAGGGGCAAGATGTATACTTAGGGTTGGCTATTGACTTCCGCTATGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCCGAGGACGGCTCAACGGCTACAGAAGACATTGGTCGATTGCAGTTGCGTAGAGCGTGGGTGAACTATGAGCAATCTGGTGCGTTCGTTGTGGAAGTAGAGAACACATCTAGGCTGTTCAGGTACGATATGTCAGGTGCTCGGTTGGGGTCTAACGCCTTGCGCGCTGGGACTCTAAACGTTGGTACTGGACAATTTAGGTTCCCCGTTGTTGGCAATGCTGCAATGAACATCGTTCGTATCATATCTGACCACACCACGCCACTCAACGTGATTGGTTGTGGCTGGGAAGGAAACTACCTGCGCCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca0104020ca0d6bbcba6aa004528e008039367d7265a4b85d510e0c876f477ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50