Protein

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Genbank accession
YP_010105541.1 [GenBank]
Protein name
putative stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEIVKELNKDDGLEFIKNGSITHAVNVIVSKDGNSIQNEQSLETIVTLDENERIVGIIPCAKELVIFTASNKIYRYNEDNKELSLIEASWKWYGGEVFGTYTYNIRGDLIIAISERDPREDVPLKVINLNNANLGSDNIFTLNPDIPQTTVVDYGQEYGGRMRNGTYLLFIRFEISDNEFSSWKDLGVVIYLSPSLTSNIISSVTLQGPTNTTSTYDIRDYAREDIEYNVNSIFATLNIDNKSGNTFKSFQIAYICTYKDGKEAFNLGSYSFNESGTYRISGNRSSKESISVDEVLISANNFNLYNVKTMCNYNNRLYVANYKEETRKLDISNIDTSSIAVGVCMEEDYYGNRLNDGYVLNVGKPIEDEVYRFYIHYVRPDGSYTEGIVIENNNYRHKKDDGTWEKIPVQIVIGRYYNTSTNKDVDIMFDCYDDTKVSDVKAAIEQAKIDYPGYYSSTIKDKLGLIDMAEKAKIDYYWFNLDPRFTNGNTTHASPYWNMIFCCPYTNNNGDRLFRTPHKIKGNFTFREVPMYEGFVGFFISYEEIQSILICDGILDQHRDIAIGISTSSKLQSSFNSVIPYGYSYQFYSDDIYVLKKSATPNVFVDLGVFSFMNRDAQSANEGWAAKYIAKDCFPSSNKIANIVNTDPYYNIENTYNMGVSASIISNTGGQYYKLTFPSVGKAITPVTVNVMDDGSAIKLTTIGRLLYVSQEIYIKKEGVKLIRLGQTKYINGEITPTGKYMYGDNLQKQNVTGFVSLQSVIIFDSGGVKFVGDWCPRFGDDSLQDERFYRRYIDNLNPSANTRDNLHINAVEFYKQTPYLPSAKIMKNNVPEVYFTYTSLGVIKNIGNKQLTAATLFDLYEIASMYYDYARPNLNAYNPNAVSNQITTYGKFIRRSNVLQSESTANAWRQFPADGYKVISENKGDIINILGIGIYLIAHCEHSMFIFNRDSTLVTKDKDVQMYMPDAFDTEYQEVFTSEKGYGGLQDYNAFTCNETGYIFFDKSKRRIYRFDDKQLNDITDGIQSIIDNYVTEDTIIDMGMDKENNRLICSFTGENWIITLSYSFITSSWISIHNYSGKYFNTKTELYLTNDNALNYVYRLGNIKVNTFLDYGDCTIPESKNIFYLGDKNVGCAVIDIIFNLEFETIKLLNYICYAIKNSSNINYSGDKILIFTNSCISSEWDISNEERNVPNLTKAYYEHGKWNFNYFRNLINTVELQEPINRLTGKYNFSIMDGEEDRITISKNYKASDSLINGKYIGIRFIIHETNSKVSLSNIECYVNKYRE
Physico‐chemical
properties
protein length:1287 AA
molecular weight: 147292,51280 Da
isoelectric point:5,08137
aromaticity:0,13209
hydropathy:-0,38500

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010105541.1
1 1287
Domain Start End Length (AA) Confidence
N-terminal 1 188 188 0,5204
Central domain 189 387 200 0,4292
C-terminal 388 1287 899 0,1859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-188
Central
189-387
C-terminal
388-1287

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage crAss002
[NCBI] 		2709317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010105541.1 [NCBI]
Genbank nucleotide accession
NC_055828 [NCBI]
CDS location
range 36687 -> 40550
strand +
CDS
ATGGAAATAGTTAAAGAATTAAATAAAGATGATGGGTTAGAATTTATAAAGAATGGTTCTATTACCCATGCTGTAAATGTCATAGTTTCTAAAGATGGTAATTCTATTCAGAATGAACAGTCTTTAGAAACTATTGTTACTTTAGATGAAAACGAAAGGATAGTAGGTATTATTCCTTGTGCTAAAGAACTTGTCATATTTACTGCTAGTAATAAGATATATCGTTATAATGAAGATAATAAAGAATTATCTTTAATTGAAGCATCTTGGAAATGGTATGGCGGAGAAGTATTTGGAACTTATACTTATAATATTCGAGGTGATTTAATAATAGCTATTAGTGAACGTGATCCTAGAGAAGATGTTCCTCTTAAAGTTATTAATCTTAATAATGCTAATTTAGGTTCTGATAATATATTTACTTTAAATCCTGATATTCCTCAAACTACTGTTGTTGATTACGGTCAAGAATATGGTGGTAGAATGAGAAATGGAACTTATTTATTATTTATAAGATTTGAAATTAGTGATAATGAATTTAGTAGTTGGAAAGATTTAGGAGTAGTTATTTATCTATCCCCTAGTCTAACTAGTAATATAATATCTTCTGTAACTCTTCAAGGACCTACTAATACTACTTCTACTTATGATATTAGAGACTATGCAAGAGAAGATATTGAATACAACGTTAATTCTATATTTGCTACTTTAAATATAGATAATAAAAGTGGAAATACTTTTAAATCTTTCCAAATAGCTTATATATGTACTTATAAAGATGGAAAAGAAGCATTTAATTTAGGTTCTTATTCATTTAACGAATCAGGTACTTATAGAATATCAGGAAATCGTAGTAGTAAAGAATCTATTTCAGTAGATGAAGTTTTAATATCCGCTAATAACTTCAATCTTTATAATGTAAAAACAATGTGTAACTATAATAATAGATTATATGTTGCTAATTATAAAGAAGAAACTCGTAAGTTAGATATTTCCAATATTGATACTAGTAGTATTGCTGTTGGAGTATGTATGGAAGAAGATTACTATGGAAATAGATTAAATGATGGATATGTTTTAAATGTAGGTAAACCAATAGAAGATGAAGTATACAGATTCTATATTCATTATGTTCGTCCTGATGGTAGTTATACAGAAGGTATAGTAATTGAAAATAATAATTATCGTCATAAAAAAGACGATGGCACATGGGAGAAAATACCTGTTCAAATAGTTATAGGAAGATATTATAATACTTCAACAAATAAAGATGTTGATATTATGTTTGATTGTTATGATGATACTAAGGTATCTGATGTAAAAGCTGCAATCGAACAAGCTAAGATAGATTATCCCGGTTATTATTCTTCTACTATTAAGGATAAACTAGGACTTATAGATATGGCAGAAAAAGCTAAAATAGATTATTATTGGTTTAATCTTGACCCAAGATTTACTAATGGTAATACTACTCACGCTAGTCCGTATTGGAATATGATATTCTGTTGTCCTTATACTAATAATAATGGAGATAGATTATTTAGAACTCCTCATAAGATTAAAGGAAACTTTACTTTTAGAGAAGTTCCTATGTATGAAGGTTTTGTAGGTTTCTTTATAAGTTATGAAGAAATACAAAGTATTCTTATATGTGATGGTATTCTTGACCAACATAGAGATATTGCAATAGGAATTAGTACTAGTAGTAAACTTCAAAGTAGTTTTAATAGTGTTATTCCTTATGGATATAGTTATCAGTTTTATTCTGATGATATATATGTATTAAAGAAAAGTGCTACTCCTAATGTATTTGTTGATTTAGGAGTATTTAGTTTTATGAATCGTGATGCTCAAAGTGCTAATGAAGGATGGGCTGCTAAATATATTGCTAAGGATTGTTTTCCGAGTTCTAATAAAATAGCTAATATAGTAAATACAGACCCGTATTATAATATAGAAAATACTTATAATATGGGAGTATCTGCAAGTATTATAAGTAATACAGGGGGACAATATTATAAACTTACTTTTCCTTCCGTTGGAAAAGCAATAACTCCTGTAACTGTTAATGTTATGGATGATGGGAGTGCTATAAAATTAACTACTATTGGAAGATTACTTTATGTAAGTCAAGAAATATATATTAAGAAAGAAGGAGTTAAATTAATTCGTTTAGGACAAACTAAATATATTAATGGAGAAATTACTCCTACTGGAAAGTATATGTATGGAGATAATCTACAAAAACAAAATGTTACAGGATTTGTATCCCTACAATCAGTTATCATATTTGATAGTGGTGGTGTTAAGTTTGTTGGAGATTGGTGTCCTAGATTTGGGGATGATTCTTTACAAGATGAAAGATTTTATAGGAGATATATAGATAACTTAAATCCTTCTGCTAATACTCGTGATAATCTTCATATAAATGCAGTAGAATTTTATAAACAAACTCCTTATCTTCCTTCTGCTAAGATAATGAAGAATAATGTTCCTGAAGTTTATTTTACTTATACTAGTTTAGGTGTTATTAAAAATATTGGTAATAAGCAATTAACTGCCGCAACATTATTTGATTTATATGAAATAGCTTCTATGTATTACGATTATGCTAGACCTAACTTAAACGCTTATAATCCAAATGCAGTTAGTAATCAGATAACTACTTATGGTAAATTTATTCGTAGAAGTAATGTTTTACAATCTGAATCAACTGCTAATGCTTGGAGACAATTTCCGGCTGATGGATATAAAGTAATAAGTGAAAATAAAGGAGACATAATTAATATACTTGGAATAGGTATTTATCTTATTGCTCATTGTGAACATTCGATGTTTATCTTTAATAGAGATTCCACTCTTGTTACTAAAGATAAAGACGTTCAAATGTATATGCCTGATGCTTTTGATACTGAATATCAAGAAGTATTTACTAGTGAAAAAGGATATGGCGGTTTACAAGATTATAATGCCTTTACTTGTAATGAAACTGGTTATATATTCTTTGATAAAAGTAAACGAAGAATATATAGATTCGATGATAAACAACTTAATGATATTACCGATGGTATTCAAAGTATTATAGATAATTATGTAACCGAAGATACTATTATTGATATGGGAATGGATAAAGAGAATAACAGACTAATCTGCTCCTTTACGGGGGAAAATTGGATTATAACCTTATCTTATTCCTTTATTACAAGTAGTTGGATAAGTATTCATAATTATTCAGGTAAGTATTTTAATACTAAAACAGAGTTATATTTAACTAATGATAATGCTCTTAATTATGTATATAGATTAGGTAATATAAAAGTAAATACTTTTCTTGATTATGGGGATTGTACAATTCCTGAATCTAAGAATATATTTTATCTAGGTGATAAGAATGTCGGTTGTGCTGTAATAGATATAATATTTAACTTAGAGTTTGAAACAATTAAGTTACTTAATTATATTTGTTATGCTATAAAAAATTCTAGTAATATTAATTATAGTGGAGATAAAATTCTTATATTTACAAATTCATGTATATCGTCCGAATGGGATATTAGTAATGAAGAACGTAATGTTCCTAATCTTACTAAAGCATATTATGAACATGGTAAATGGAACTTTAATTACTTCCGTAATCTAATTAATACAGTTGAATTGCAAGAACCTATAAATAGGTTAACTGGAAAATATAACTTTAGTATAATGGATGGAGAAGAAGATAGAATAACGATAAGTAAGAATTATAAGGCTAGCGACAGTCTTATCAATGGTAAATATATTGGTATTCGTTTTATTATTCATGAAACTAATTCTAAAGTTAGTCTAAGTAATATTGAATGTTATGTTAATAAATACAGAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
db76cb03fa741cf88fb2c5ae14e05d1177fd9e3ead57a14e16b505386260cd99
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2527
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PhicrAss002; a novel member of the crAss-like phage family isolated from the human gut following selective antibiotic enrichment Guerin,E., Shkoporov,A.N., Stockdale,S.R., Khokhlova,E.V., Clooney,A.G., Daly,K.M., Draper,L.A., Ross,P.R. and Hill,C. 2021-04-12 — GenBank