Protein
View in Explore- Genbank accession
- XAI70311.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTFTF
- Protein sequence
-
MAYSTQRAVSDGTLQLLMIALEFFDKSEISVYLNNAPTTAYTWATDKSIRMDAVVPQGVELMFRRTTDLSQVRHVFSSGAQFKDSTLDDDFKQILHIAQEAVEGANVGDIYADLNMHGNRVLNVGPAIADGDAVSLGQVKTESASAWVAASQARINNEQSFINLQQAEINNAQSLLNSEASLVNNQQSFTNLEQTVINNAQSLLNRTASEVAAATAKAEADRAVDANTSKQDQSPVLTDLAALEPAANQIPVSSGARGFAMKPITALAQNLIASQSQADMRTVLGLSKAGATRLFNTEVVTPATLDDGLFWGFKADASGDGNGNKCNMFSLVVQSDQVRQRDGVNGMTGLKVEGLGVRHLFGGGPTEGGRHAGGFLLQQVAATASTNKDRNYVGVQGHVITTSGDGGTDGAPQGAYFAGSGFTAILNDAYNVMNATSWEFNTYIMKGTGANAGKRVNIHTGLQIASYIEERGYGLDTAISVGCLSPSPLGFKYGMTFSSTHGAPAFGADSTAFKLLPSCSPTGAIDAFADLVGVTTNALIRTSTTELRDQGLRMSRANVGLTLGTSSASSVVTLKALTSGLNSSYDFQLTFSSGSASIGKGVLQLEGDAIIVPFGRPDGDATRDWGASNFRFKTFWASTSTINTSDARKKTAVRKLSASELAAAKDLSREVGMYQWLDSVKDKGENARLFCGMTVQRAMEVMASHYLDPFKYSFICYDKWDYSPAVYNTDEEGVTTLIHPEILAGDLYSFRLDDLQSFLIAGLNARLEAAGI
- Physico‐chemical
properties -
protein length: 772 AA molecular weight: 82180,87820 Da isoelectric point: 5,15771 aromaticity: 0,07902 hydropathy: -0,13964
Domains
Domains [InterPro]
IPR005604
ATT
4–105
ATT
4–105
DC_0363
ATT
45–167
ATT
45–167
IPR030392
CHP
645–772
CHP
645–772
IPR030392
CHP
645–705
CHP
645–705
cd10144
CHP
645–766
CHP
645–766
1
772
Architecture
ATT 4-167 | STR 168-732 | RBD 733-772
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pseudomonas phage Draal02 [NCBI] |
3138531 | Viruses > unclassified bacterial viruses > |
| Host |
Pseudomonas syringae [NCBI] |
317 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XAI70311.1
[NCBI]
Genbank nucleotide accession
PP179321.1
[NCBI]
CDS location
range 25949 -> 28267
strand +
strand +
CDS
ATGGCCTATTCGACTCAGCGTGCCGTTTCTGACGGTACGTTGCAGTTGCTGATGATTGCGCTTGAGTTCTTCGATAAGTCGGAGATCAGCGTATACCTCAACAACGCACCAACAACCGCGTACACTTGGGCTACAGATAAGAGCATCCGCATGGATGCCGTTGTGCCGCAGGGCGTGGAACTCATGTTCAGACGTACCACGGACCTGTCTCAAGTACGGCATGTGTTCTCATCAGGTGCGCAGTTCAAAGACTCCACACTAGACGACGATTTTAAACAGATCCTGCACATTGCTCAGGAGGCAGTGGAAGGTGCTAACGTTGGTGACATCTATGCCGATCTGAACATGCACGGCAACCGTGTCCTTAACGTAGGCCCAGCTATAGCCGATGGGGATGCCGTATCGCTAGGGCAAGTCAAAACCGAATCAGCTAGCGCTTGGGTAGCAGCCTCTCAGGCCAGAATAAACAACGAACAATCTTTCATTAACCTGCAACAGGCTGAGATTAACAATGCACAGTCGCTCCTGAACTCGGAGGCCTCGCTGGTGAACAACCAGCAGTCTTTTACGAACTTAGAGCAGACGGTTATCAACAACGCCCAGTCCTTGTTAAACCGCACAGCTTCTGAGGTGGCAGCTGCTACAGCCAAGGCTGAGGCAGACAGGGCTGTAGATGCCAACACCAGCAAGCAGGACCAAAGCCCGGTACTCACAGACCTAGCTGCACTAGAACCTGCTGCAAATCAGATCCCTGTTAGCTCCGGTGCACGCGGCTTTGCTATGAAGCCTATCACGGCCTTGGCACAGAATCTCATCGCGTCCCAGAGTCAAGCGGATATGCGCACAGTTCTGGGCTTGAGCAAAGCGGGCGCTACCCGGTTGTTCAACACTGAGGTGGTGACTCCCGCGACTCTGGATGATGGTTTGTTCTGGGGTTTCAAGGCAGACGCCTCTGGTGACGGCAACGGCAACAAGTGCAACATGTTCTCGCTCGTTGTGCAGTCCGACCAAGTCCGGCAGCGCGATGGCGTGAACGGCATGACGGGCCTTAAAGTGGAAGGGCTTGGTGTTCGTCACCTGTTTGGTGGCGGGCCTACTGAGGGCGGTCGCCATGCCGGTGGGTTTCTACTCCAACAAGTAGCTGCTACAGCAAGCACCAACAAAGACCGCAACTACGTAGGTGTGCAGGGTCATGTCATCACTACCTCCGGTGACGGTGGTACAGATGGCGCGCCACAAGGTGCGTACTTCGCAGGCTCTGGTTTCACTGCTATCCTGAACGACGCATACAACGTGATGAATGCCACTAGTTGGGAATTCAACACGTACATCATGAAGGGTACTGGGGCGAACGCAGGTAAGCGCGTTAACATCCATACCGGCTTGCAAATCGCCTCTTACATCGAGGAACGTGGGTACGGTCTGGATACCGCAATCTCTGTCGGCTGCCTATCCCCATCCCCGCTTGGTTTCAAGTACGGCATGACGTTCTCCAGTACGCACGGCGCCCCTGCGTTTGGGGCAGACAGCACCGCATTCAAGCTGCTGCCGTCGTGCTCGCCGACCGGCGCTATCGACGCATTCGCGGACCTCGTGGGAGTTACCACTAACGCCCTGATCCGCACCAGCACCACTGAGCTGCGCGATCAAGGCTTGCGCATGTCCCGTGCTAACGTCGGCCTCACGCTGGGCACGTCCAGCGCTTCCAGTGTGGTCACTTTGAAAGCACTGACTAGCGGCCTGAACAGCTCGTACGACTTCCAACTGACATTCTCCAGCGGCTCGGCGTCTATCGGTAAAGGTGTGCTCCAGCTGGAAGGTGATGCGATCATAGTGCCGTTCGGTCGTCCTGATGGCGATGCTACCCGCGACTGGGGTGCATCGAACTTCCGGTTCAAGACCTTCTGGGCCTCTACCTCTACCATCAACACTTCGGATGCCCGTAAGAAGACTGCTGTGCGTAAGCTCAGCGCTAGCGAACTGGCAGCTGCTAAAGACCTCAGCCGCGAAGTTGGTATGTACCAGTGGTTGGACTCCGTCAAAGATAAAGGCGAGAACGCTCGGCTGTTCTGCGGCATGACCGTACAGCGCGCTATGGAAGTCATGGCCTCCCACTACTTGGACCCGTTCAAGTACAGCTTCATCTGCTACGACAAGTGGGACTACTCCCCGGCTGTGTACAACACAGACGAAGAGGGTGTCACTACTCTCATCCACCCAGAAATCCTTGCTGGCGACCTGTACAGCTTCCGTCTTGATGATCTGCAATCATTCCTGATTGCAGGTCTGAATGCCCGACTGGAGGCCGCTGGCATCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
37843ebd721f67706a5134ebace75b2fb01219e6736b91afe9c6adffe31d52cb
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50