Protein

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UniProt accession
F4N9V1 [UniProt]
Protein name
Putative tail fiber protein gp53-like C-terminal domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAQDSILAVDVIKTPDSTVSVRVEDLLSTSEATIDKLTWTNDVGTSSSLLTFVNQRRDLVSHFGADPSGLTDSTAALQAACEWVFGSTAGRRLDIPCGRYVLTSAITVDIAGGNGTIMGYGVGQASLRWTADSDSQGFKFGVTTPMARLNMGNLQASTGYVSGDAFLEFHANGGAVNSFRMFDMLVYGDGLLGTAANGYFGGGLVRAFNTNAPLLENLTFYSVDGSKENYLLTPTAIALTSTTNATLFARLVNCNVAHVGYAAYLKSSHVPGMEGIVIDGFNGMCAFGIKVDASASGNAGYYPPQCNITNSQIEYYASGLDINHVSVFQAEGLTLLQRPDSTETATAIVMTDCRRSHVANVYIEARPGTTGNGVWCNGACDFVQINNLQALINAGYTAIIAGGASTNITYSNCSVVGGGGNLYANISTAPATNDTASYNTTSECSTEIGNGIIVKAGSKTVTLGSGGSFSINWNSAFPNACLTVVPVNGDVSALASSTIGVGTKNVTGFTGTVPGGSSGNSVRINYIAYGS
Physico‐chemical
properties
protein length:531 AA
molecular weight: 55019,72420 Da
isoelectric point:4,83202
aromaticity:0,08475
hydropathy:0,10866

Domains

Domains [InterPro]
DC_1406
STR
1–529
DC_1406
IPR012334
STR
60–337
IPR012334 G3DSA:2.60.40.3940
IPR011050
STR
60–445
IPR011050 IPR054075
F4N9V1
1 531
Architecture
STR
STR 1-530 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
F4N9V1
1 531
Domain Start End Length (AA) Confidence
N-terminal 1 72 72 0,8148
Central domain 73 442 371 0,9788
C-terminal 443 531 88 0,9728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-72
Central
73-442
C-terminal
443-531

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage LIMEzero
[NCBI] 		943335 Uroviricota > Caudoviricetes > Autographivirales > Stentvirinae > Waewaevirus
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBY88579.1 [NCBI]
Genbank nucleotide accession
FR751545 [NCBI]
CDS location
range 36458 -> 38053
strand +
CDS
ATGGCACAAGATAGCATCCTGGCTGTCGATGTAATCAAAACGCCCGACAGCACAGTATCTGTCCGTGTAGAGGATTTGCTATCTACGTCTGAGGCCACAATTGACAAGCTCACGTGGACCAACGATGTGGGCACGTCAAGCTCTCTGCTGACATTCGTTAATCAGCGCCGTGACCTGGTGTCGCACTTTGGCGCTGACCCGTCCGGCCTAACTGATTCAACAGCTGCACTGCAGGCTGCATGCGAATGGGTGTTCGGCAGCACAGCTGGCCGCCGACTGGATATCCCATGCGGTCGATACGTGCTGACATCTGCGATTACTGTGGACATTGCTGGCGGTAATGGCACAATCATGGGTTACGGCGTTGGCCAGGCTAGCCTGCGCTGGACTGCTGATAGTGACAGTCAGGGCTTTAAGTTCGGCGTCACTACGCCTATGGCGCGCCTGAATATGGGTAACCTGCAGGCCAGTACCGGCTACGTGTCAGGCGATGCGTTCCTAGAGTTCCATGCCAATGGCGGCGCTGTCAACTCGTTCCGCATGTTTGACATGCTGGTGTACGGTGATGGTCTGCTGGGTACAGCGGCTAATGGTTACTTCGGCGGCGGCCTGGTTAGGGCGTTCAATACCAATGCGCCACTGCTGGAAAACCTGACGTTCTACAGTGTGGATGGTTCGAAGGAAAACTACCTGCTGACTCCTACGGCTATTGCGCTTACGTCCACTACCAACGCCACGCTGTTTGCGCGACTGGTGAACTGTAACGTCGCACACGTAGGCTATGCTGCGTACCTGAAATCGTCCCATGTACCGGGTATGGAAGGCATCGTAATTGATGGCTTTAACGGTATGTGTGCATTCGGTATCAAGGTCGATGCGTCGGCGTCTGGTAACGCAGGGTACTACCCGCCACAGTGCAACATTACGAACTCGCAGATTGAGTACTACGCCAGCGGTCTGGATATCAACCACGTTAGCGTGTTCCAGGCGGAAGGGCTTACACTGCTGCAGCGCCCGGACTCAACCGAGACAGCCACAGCTATAGTAATGACTGACTGCCGTCGCTCTCATGTTGCCAACGTGTACATCGAAGCGCGCCCAGGGACCACGGGCAATGGCGTCTGGTGTAACGGCGCATGCGACTTCGTGCAGATTAATAACCTGCAGGCACTCATCAATGCTGGCTACACTGCAATTATCGCGGGTGGTGCGTCCACCAACATCACATACTCCAACTGCTCCGTCGTCGGCGGCGGTGGTAACCTGTATGCGAACATCAGTACTGCACCGGCGACTAATGACACCGCGTCGTACAACACCACCAGCGAGTGCTCTACTGAAATCGGTAATGGCATTATCGTTAAAGCTGGCTCGAAAACAGTAACGCTAGGCTCGGGTGGCAGCTTCTCTATTAACTGGAACTCCGCCTTCCCCAACGCCTGCCTGACAGTTGTACCAGTCAACGGTGATGTCTCGGCGCTGGCGTCCAGTACCATCGGTGTTGGTACGAAAAACGTGACCGGCTTTACTGGCACAGTACCTGGCGGTTCGTCTGGTAACTCTGTCCGCATCAACTACATCGCCTACGGGAGTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098994 symbiont entry into host cell via disruption of host cell envelope Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
ebc2e1a5c3215704fb13f782003ea129f5e17a4b5a57a4cefad1fa1f9ba0345d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8155
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50