Protein

View in Explore
Genbank accession
XAG93520.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MMDQEIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVDTSGFDRVEIRRFTSASERIVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGIDGTDAINKNQLDTTLGEAGGILSEIKGEKEQFYEYLEKFADDTTMIRGVTWVYNGGSAVGGETSIVINKPTAVFAVPYIEINGDRQEAGYQYDFNASTQTITLAKPLVAGDFLMAMTSESHLPLESLLAGTTGASSIGTKDGGNVQSALDNLGYYIVPESFGAKGDGVTDDTAAVQAAINAAKGKTLWLDASKMYICQNLVIPHAMTIAAGGRRQGGGLIPKGNSGPVVHSGDFILITSEQTVTLFNVTIDARGRPLTKVDGQRLNGLRQVDNTSGVYKSGFQLYNCNISGFSGLNIIGGASSSFGIIKDTQCESADLTCIRIQGVDWRIDHTYVGRSGTGHGIELLNESNVVSNCDSYFNKKSGVVYTQATGKTFFKLIACTLNSNGEHGVYIACPYMQPAGIIIVDNRFWNNSTSSDGVYSNITLSYGRGHIVVGNIHEAYQPADGSSSARAAYCVNLLNGARPAHMLDNYDPAYSYRTDFCNINVVDKINYNTHHIGSAKTFTVGVSSATSQAIGVFVDGESFPRASIGNGGIRFGKGDSAPAVGLGFDNNYPNHVVSFKGLAVLGAWDTSTFRVGGYRIWAGNGAGQLYFQYGADPTSQTDGKLFVGRTVSPPASSSSSGNTGDIAIDSGFLYVCVAFNTWKRVALSTF
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85177,28440 Da
isoelectric point:5,69995
aromaticity:0,09332
hydropathy:-0,14515

Domains

Domains [InterPro]
DC_0778
STR
1–314
DC_0778 DC_0520
IPR005604
ATT
3–128
IPR005604 DC_0715
IPR011050
STR
294–574
IPR011050
IPR012334
STR
299–613
IPR012334
XAG93520.1
1 793
Architecture
ATT
STR
RBD
ATT 1-128 | STR 129-613 | RBD 614-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG93520.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,9917
Central domain 312 643 333 0,9842
C-terminal 644 793 149 0,7978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-643
C-terminal
644-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage YMR2
[NCBI] 		3154096 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG93520.1 [NCBI]
Genbank nucleotide accession
PP662633.1 [NCBI]
CDS location
range 23051 -> 25432
strand -
CDS
ATGATGGACCAAGAAATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCACTGGTGTCAGACGACAACCGCAGACTACTGAGCAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTCCTTGTGGATACATCTGGGTTCGACCGTGTGGAAATCCGACGGTTCACCTCAGCGTCTGAGCGAATCGTTGACTTCAGTGATGGCTCGGTTCTGCGCGCTGCTGACCTTAACGTATCTCAGATACAGTCGGCACATATCGCAGAGGAAGCACGTGATGCGGCACTCATGGCCATGCCTCAGGATGATGCGGGTAACCTTGATGCTCGAAATCGTAGAATAGTACGGTTGGCTCCGGGTATCGACGGTACGGACGCAATCAACAAGAACCAGCTTGATACAACGCTTGGTGAGGCTGGCGGAATCCTCTCAGAGATAAAGGGTGAAAAGGAACAGTTCTACGAGTACCTTGAGAAATTCGCAGACGATACCACGATGATTCGTGGAGTGACTTGGGTCTACAACGGGGGCTCGGCAGTCGGTGGCGAGACGTCTATCGTAATCAATAAACCGACAGCCGTGTTTGCTGTACCGTACATTGAGATAAACGGTGACAGACAAGAGGCTGGCTATCAGTACGACTTCAACGCCAGTACCCAGACAATCACTTTAGCGAAGCCGTTGGTGGCTGGTGACTTCCTGATGGCCATGACCTCTGAGTCGCATCTGCCACTGGAGTCGCTTCTTGCTGGAACAACTGGTGCATCTTCGATTGGTACCAAGGATGGTGGTAACGTACAATCTGCGCTGGATAACCTTGGGTACTACATCGTTCCAGAGTCGTTTGGTGCTAAGGGTGACGGTGTGACAGATGATACCGCAGCAGTCCAAGCAGCTATAAATGCAGCTAAAGGCAAGACTCTGTGGCTAGACGCATCTAAGATGTACATTTGTCAGAACTTGGTCATACCACATGCGATGACTATTGCGGCAGGAGGTCGCAGGCAGGGAGGCGGTCTGATTCCTAAAGGTAACTCAGGTCCTGTAGTACACTCCGGGGACTTCATCTTGATTACCTCCGAGCAGACCGTGACATTGTTCAACGTTACGATTGATGCCCGAGGTCGTCCACTGACTAAGGTAGACGGTCAACGCCTGAACGGTCTACGACAGGTTGATAATACCTCTGGTGTCTACAAGTCTGGTTTCCAGCTGTATAACTGCAACATCTCAGGATTCTCTGGGCTCAACATCATTGGTGGCGCTTCTAGCTCCTTTGGTATCATTAAGGACACTCAGTGTGAATCTGCCGACCTGACCTGTATTCGTATCCAAGGCGTTGATTGGCGAATCGACCATACCTATGTTGGGCGTAGTGGGACTGGTCACGGCATTGAGTTGCTTAACGAGTCAAACGTGGTGTCTAACTGTGATTCATATTTCAACAAGAAGTCTGGTGTTGTGTACACGCAGGCAACCGGGAAGACCTTCTTTAAGCTCATCGCCTGTACGCTGAACTCTAACGGAGAACACGGCGTTTACATTGCGTGTCCGTACATGCAACCTGCTGGTATCATCATTGTTGATAACCGCTTCTGGAACAACTCAACGTCTTCAGACGGAGTCTATAGCAACATCACGCTTAGCTACGGTCGAGGGCACATTGTTGTTGGCAACATCCACGAGGCGTACCAACCAGCAGACGGCAGCAGCTCGGCAAGGGCAGCTTACTGTGTTAACCTGCTGAACGGTGCCCGTCCGGCTCACATGCTTGACAACTACGACCCGGCGTATTCCTATCGGACCGACTTCTGCAACATTAACGTCGTCGATAAGATTAACTACAATACCCACCACATTGGTAGCGCCAAGACGTTCACCGTGGGCGTCTCGTCAGCCACCTCTCAGGCTATTGGCGTATTTGTTGACGGGGAGTCATTCCCGAGAGCGTCCATTGGTAACGGCGGAATCCGGTTCGGTAAGGGTGACTCTGCGCCAGCTGTAGGGCTTGGCTTCGACAACAACTATCCGAACCACGTGGTATCGTTCAAGGGCCTTGCTGTTCTCGGGGCTTGGGACACCAGTACATTCAGGGTCGGTGGGTATCGAATCTGGGCAGGCAACGGGGCAGGTCAGCTGTACTTCCAGTATGGTGCGGACCCTACGAGCCAGACGGACGGCAAACTGTTCGTTGGGCGCACTGTGTCGCCACCAGCTTCTTCTTCATCTTCTGGTAACACAGGGGATATCGCCATCGACTCAGGGTTCCTTTATGTGTGCGTAGCGTTCAACACATGGAAACGGGTTGCACTTTCTACGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1ebf26c9ed5de0045e04842d173392f66f724e7220537b525973480d626de1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7223
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50