Protein

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Genbank accession
WMM35394.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQLSKYAVDKAATDASINSINESIGNINTALGGINTTLGTKAAKGANNDITELNALTKAITIAQGGTGATDVAGARKNLGLTAFEMTAVDTRMFSPDRKKILRISDSMWGAYNPETGQEIALGISSGGTGALNPKNARKNLNIPVGANAEIIPANSNVLDYIAIAGQSGYYSSGDLVTHIPPVKEGWWTYNFHCHGVDINGAAQYGVLKAVGLSGSSWINVLDGTGNWKGWQEQFNLQSTVPVTNGGTGATTAAGAITKLGIPNIAEWTPANGVVRWIVNTLSEPTSTGTILRGGLLESSHNIAGVQRVITSLVPEYTWGEPDTVANLNVALADAQGHIIRYGGYKFSSGGVASFNTLRALSFDGIILDRGGDPTFSNRIVLETVKGAEGATLAGSMANFVDGTSRVVVNALSISNNRKTVLYPSGGVICKPGLLGDPQLYSYSIDYSGGAAQLWIDSSNFGNIQTAPVSDKLLKKDITYRTDNEVALKQVMLWKIADFRYKNRGMLPESEMKTGWIANDLVTISPECVKGVGLTKGFDENNPKGAYELDTVAIMAKMSQAIQAQQKEIEELKELVNQLLTK
Physico‐chemical
properties
protein length:625 AA
molecular weight: 66124,05310 Da
isoelectric point:6,29062
aromaticity:0,07040
hydropathy:-0,08400

Domains

Domains [InterPro]
DC_0017
STR
1–625
DC_0017
IPR030392
CHP
513–573
IPR030392 Coil
IPR030392
CHP
513–619
IPR030392
WMM35394.1
1 625
Architecture
STR
STR 1-625
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM35394.1
1 625
Domain Start End Length (AA) Confidence
N-terminal 1 363 363 0,6221
Central domain 364 562 200 0,2289
C-terminal 563 625 62 0,8986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-363
Central
364-562
C-terminal
563-625

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage EH7
[NCBI] 		2986511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM35394.1 [NCBI]
Genbank nucleotide accession
OR413347.1 [NCBI]
CDS location
range 80106 -> 81983
strand -
CDS
ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCTTATGTTGTAGTTAATAGAGACGCCGCGGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTTGTACTAACTTCTAAATACCTTCAATTGTCTAAATATGCTGTTGATAAGGCTGCTACTGATGCATCTATCAATAGTATTAATGAATCTATTGGTAATATTAACACTGCTCTTGGAGGAATTAATACTACTCTAGGTACTAAAGCAGCTAAAGGTGCTAATAATGATATTACTGAACTAAATGCACTTACAAAAGCTATAACTATTGCTCAGGGTGGTACTGGCGCTACTGATGTTGCTGGAGCTAGAAAGAATCTAGGTCTTACGGCTTTTGAAATGACTGCTGTAGATACTAGAATGTTTAGTCCAGACAGGAAAAAGATACTTAGAATATCTGATTCCATGTGGGGGGCCTATAACCCTGAAACAGGCCAAGAAATTGCACTAGGGATTAGTAGTGGAGGTACTGGTGCTTTAAATCCTAAGAACGCAAGGAAAAATCTAAATATCCCTGTTGGGGCTAATGCGGAGATAATTCCGGCAAATAGTAATGTCTTAGACTATATTGCTATTGCAGGTCAAAGTGGATACTACTCTTCCGGGGATTTAGTTACACATATACCTCCTGTTAAAGAAGGTTGGTGGACGTATAATTTCCACTGTCATGGGGTAGATATTAACGGTGCTGCACAGTATGGTGTTTTAAAGGCTGTTGGATTATCAGGTAGTTCATGGATTAACGTTCTAGATGGTACAGGTAACTGGAAAGGTTGGCAAGAACAGTTTAATCTGCAATCAACTGTCCCAGTAACTAATGGTGGTACTGGAGCAACTACGGCTGCAGGTGCTATAACTAAATTAGGAATTCCTAATATTGCAGAATGGACCCCTGCTAATGGGGTAGTACGTTGGATAGTTAATACTCTTTCTGAGCCTACAAGTACAGGTACAATATTAAGAGGGGGATTACTAGAAAGCTCTCATAATATTGCTGGGGTACAGCGTGTTATTACTAGTTTAGTTCCTGAGTATACGTGGGGTGAACCTGATACAGTTGCTAATCTCAACGTTGCGTTAGCTGATGCACAAGGTCATATTATTCGCTATGGCGGGTATAAATTCTCTTCTGGTGGGGTAGCTTCTTTTAACACTCTGAGAGCTTTATCATTTGATGGTATTATACTAGATAGAGGTGGAGATCCTACTTTCTCAAATAGAATAGTTCTTGAGACAGTAAAAGGAGCTGAAGGCGCTACATTAGCGGGGAGTATGGCTAACTTCGTAGATGGGACATCACGAGTAGTAGTTAACGCTTTGAGTATCTCTAATAATAGAAAGACTGTTCTATATCCTAGCGGTGGTGTTATATGTAAGCCTGGACTTCTAGGAGATCCACAACTTTATAGTTATAGCATTGACTATTCTGGAGGAGCTGCACAGCTGTGGATTGATAGTTCTAACTTTGGTAATATACAAACAGCACCAGTATCTGATAAGTTACTAAAGAAAGACATAACTTATCGTACGGATAATGAGGTTGCCCTTAAACAAGTAATGCTGTGGAAGATAGCTGACTTTAGGTACAAGAATAGAGGTATGCTACCTGAGTCGGAGATGAAAACTGGTTGGATTGCAAACGATCTTGTAACTATAAGTCCAGAGTGTGTCAAAGGCGTAGGATTAACCAAAGGTTTTGATGAAAATAACCCTAAAGGAGCTTATGAACTAGATACGGTTGCAATAATGGCTAAAATGTCTCAGGCTATTCAAGCACAGCAAAAAGAGATAGAAGAGTTGAAAGAACTTGTCAATCAACTACTCACTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c429bf176cac781cfd7a899bfaf1628e65549ea941db481a6173bb42f02bf9ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Salmonella and Escherichia coli-specific bacteriophages collected from Minnesota Wastewater Treatment Plant Cortes Ortega,E., Hansen,E.G., Farmer,M.L., Martinez-Villalobos,J.M. and Bowden,S.D. 2024-11-27 — GenBank