Protein

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Genbank accession
YP_010767513.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSIVIRRNNGDILWFDAITQYDVNYTATVTKHPVASGGFISDHTTTDNVILNISGILSDAAELHCDSN
Physico‐chemical
properties
protein length:68 AA
molecular weight: 7423,13750 Da
isoelectric point:4,57676
aromaticity:0,07353
hydropathy:-0,00294

Domains

Domains [InterPro]
DC_0601
STR
1–66
DC_0601
IPR048494
ATT
15–59
IPR048494
YP_010767513.1
1 68
Architecture
STR
ATT
STR 1-14 | ATT 15-66 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa347
[NCBI] 		1460364 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psa347
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010767513.1 [NCBI]
Genbank nucleotide accession
NC_073685.1 [NCBI]
CDS location
range 47315 -> 47521
strand +
CDS
ATGTCTATCGTTATCAGACGTAACAACGGCGACATTCTGTGGTTCGACGCAATCACACAATACGACGTGAACTACACTGCGACAGTAACTAAACACCCCGTCGCCAGCGGCGGGTTTATCTCTGACCACACGACAACCGACAACGTTATCTTGAACATCAGCGGTATTCTTTCTGACGCAGCTGAACTACACTGCGACAGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
013c6665acbedaaf7b619dab362282d9df22ae19df83c88039d08461fad2c486
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank