Protein

View in Explore
Genbank accession
YP_010065306.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIVGVPGWIGESAVNETGQRWMDAAMKAVRVSVPGWMSSMAGQSKEVYYSIGASNSYNKDTLINYLKSQGSTPVVVTITGNLVSSSAGQPCLDFPSSLTNAYVTLIINGGVTVYGRGGRGAQAGNQAGEAGGTAINNGIGTRLRITNNGAIAGGGGGGGAQSTDNRWGGKYVSGGGGGRPFGAGGNNGAKAPGASASLTSPGAGGKMYSGVGYYGGDGGNVGERGKDAVRLNGYSNSPGAAGKAVTGNAPTWTKVGTIYGSRV
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26086,56560 Da
isoelectric point:9,76420
aromaticity:0,07197
hydropathy:-0,23674

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_1679
STR
6–160
DC_1679
YP_010065306.1
1 264
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-160 | RBD 161-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CroM_CrRp10
[NCBI] 		2079276 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Citrobacter rodentium
[NCBI] 		67825 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010065306.1 [NCBI]
Genbank nucleotide accession
NC_054899.1 [NCBI]
CDS location
range 134410 -> 135204
strand +
CDS
ATGGCAATTGTAGGTGTTCCTGGTTGGATTGGTGAATCTGCCGTGAATGAAACTGGACAACGTTGGATGGATGCTGCAATGAAAGCAGTTCGCGTTTCAGTTCCCGGTTGGATGAGCTCAATGGCTGGACAATCTAAAGAAGTATATTATAGTATTGGTGCTAGCAATTCTTATAATAAAGACACACTAATAAATTATCTCAAATCTCAAGGAAGTACTCCTGTTGTTGTTACTATTACTGGTAACTTAGTTTCTTCATCTGCAGGGCAACCTTGCTTAGATTTTCCTAGCTCATTAACTAATGCTTATGTAACGCTTATTATAAATGGCGGTGTAACAGTATACGGTCGCGGAGGACGTGGTGCGCAAGCGGGAAACCAGGCAGGTGAAGCTGGCGGTACTGCAATTAACAATGGTATAGGTACTCGTCTACGAATCACTAACAATGGAGCAATCGCTGGCGGCGGCGGTGGTGGTGGCGCCCAATCAACTGATAATAGATGGGGAGGTAAATATGTTTCTGGCGGTGGCGGCGGACGTCCTTTCGGAGCTGGTGGTAATAATGGAGCAAAAGCTCCGGGTGCATCAGCATCTTTAACATCTCCAGGCGCTGGCGGAAAAATGTATTCCGGCGTTGGATACTACGGTGGTGACGGTGGTAATGTTGGTGAACGAGGTAAGGATGCGGTTAGATTGAACGGCTATTCGAACTCACCTGGCGCAGCAGGTAAAGCTGTTACTGGTAATGCTCCAACTTGGACTAAAGTTGGTACAATATATGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5bb088b6129c84b934bb819415b04d8531902154d88285f781328b2b75ce0701
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Citrobacter rodentium phages Mizuno,C.M., Debarbieux,L. and Roach,D.R. 2008-04 — GenBank