Protein

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Genbank accession
WDY79159.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADNTPRLNLGTYAQGDEDWSHNDTVEALDELAIDRGPISSRPTSGDYDDQMYYAVDQRILWRWDAGSSDWTAAGGLGVSSQRLPATSYLDAVDVSTLAAGDVNLSGTLAAGDVNLSGTLTGLLLGDAADVAGNPLQNVDTVTASGTAISVDSPVAGQSPQTETHLTTKGYVDSVAQGLDWQESVLERRNDPPATPSDGDRYLVDDAPTGDWSANADEIAEWDADAAAWVFYDPNEGWAVFVESINVLETFVDGAWVDFGSAIDHGALNGTGDDDHLQYLHVDGRRSLTGSLDADDNDLENVGAVSETENVVADAGASYDIDLSNGGVHKITLTQDCDITLSGIDAAASNSATLIVEQDGAGGHSLTWSTAVLWPRGNPPVVTYGAGEIDRFAFTHIDGDWLGSEAGAGFA
Physico‐chemical
properties
protein length:411 AA
molecular weight: 43144,80760 Da
isoelectric point:4,05003
aromaticity:0,07543
hydropathy:-0,27080

Domains

Domains [InterPro]
DC_0931
RBD
5–411
DC_0931
IPR021251
STR
185–257
IPR021251
WDY79159.1
1 411
Architecture
RBD
STR
RBD
RBD 5-184 | STR 185-257 | RBD 258-411
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halorubrum tailed virus
[NCBI] 		2992037 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halorubrum lacusprofundi
[NCBI] 		2247 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDY79159.1 [NCBI]
Genbank nucleotide accession
OP630575 [NCBI]
CDS location
range 48340 -> 49575
strand +
CDS
ATGGCAGATAATACACCACGACTTAACCTCGGCACATACGCACAGGGCGACGAAGACTGGTCACACAACGACACCGTCGAGGCGCTCGACGAACTGGCGATTGATCGCGGCCCGATCTCGTCGCGGCCGACCAGCGGGGACTACGACGACCAGATGTACTACGCGGTGGATCAACGCATCCTGTGGCGGTGGGATGCGGGATCATCCGACTGGACCGCCGCGGGCGGCCTCGGTGTGTCGTCGCAGCGCCTACCGGCAACGTCCTACCTCGACGCCGTCGACGTCAGCACACTGGCGGCGGGGGACGTCAACCTGTCCGGCACACTGGCGGCGGGGGACGTCAACCTGTCCGGCACGCTGACGGGGCTCCTCCTCGGGGATGCAGCCGACGTCGCCGGCAACCCACTACAGAACGTCGATACGGTCACCGCCTCGGGGACCGCGATCTCGGTCGACTCACCCGTCGCCGGCCAGAGCCCCCAGACTGAGACGCACCTCACGACCAAGGGGTATGTCGACAGCGTCGCCCAGGGCCTCGACTGGCAGGAGAGCGTCCTCGAACGACGCAACGACCCACCGGCCACGCCAAGCGACGGAGATCGTTATCTCGTTGACGACGCGCCGACTGGCGACTGGTCGGCCAACGCGGATGAGATCGCGGAGTGGGATGCCGACGCCGCAGCGTGGGTGTTCTATGACCCTAACGAGGGTTGGGCGGTGTTCGTCGAGAGCATCAACGTCCTGGAGACGTTCGTCGACGGTGCTTGGGTCGACTTTGGCTCCGCCATCGATCACGGCGCACTCAACGGGACGGGAGACGACGACCACCTGCAGTACCTCCACGTCGACGGCCGGCGGTCGCTGACAGGATCCCTCGATGCCGACGACAACGATCTCGAAAACGTTGGGGCTGTCTCGGAGACCGAGAACGTGGTCGCCGACGCGGGAGCATCGTACGATATCGATCTCTCGAATGGCGGCGTGCACAAGATCACACTGACGCAAGACTGCGACATCACACTCTCAGGCATCGACGCAGCGGCCTCGAACTCGGCGACGCTGATCGTTGAGCAGGACGGGGCGGGCGGCCACTCGCTGACGTGGTCGACGGCCGTGCTGTGGCCTCGTGGCAACCCGCCGGTCGTCACCTACGGAGCTGGGGAGATCGACCGTTTCGCGTTCACGCACATTGATGGCGACTGGCTCGGGAGTGAGGCAGGGGCAGGGTTCGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
431536882464f7898f3f9f81c19138531525854a9519fafba26783fd7f6fcf51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8000
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In depth characterization of an archaeal virus-host system reveals numerous virus exclusion mechanisms Mercier,C., Thies,D., Zhong,L., Raftery,M.J., Cavicchioli,R. and Erdmann,S. 2022 — GenBank