Protein

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Genbank accession
AFH14728.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MATSISQRFEKAGDFYLLDDVDLRGGFRVVTSIAERDAIPLPARKQGMVVRVLDKVAGTTVNYELPFGKPITNANWIEWKVGAGGDFIPTAGGNLDGELKLGAAASFNFDDALKAEIVDRNLLFTPVGTFDPDDPEPQGLMAFGNETENTIEINPWIGQIVCKTEVALASDRSLKTDITRIENAMKILRRMHGYTFQKIGNTDRMFTGLIAQEVAQVFPEAVCHSTDGKLAVYYGSLAGLFVECLTDVDERLIEFGKRLDALEAKGEA
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29356,06200 Da
isoelectric point:4,73693
aromaticity:0,08582
hydropathy:-0,10299

Domains

Domains [InterPro]
DC_0772
STR
1–260
DC_0772
IPR030392
CHP
170–266
IPR030392
IPR030392
CHP
170–222
IPR030392
AFH14728.1
1 268
Architecture
STR
STR 1-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14728.1 [NCBI]
Genbank nucleotide accession
JQ768459.1 [NCBI]
CDS location
range 150421 -> 151227
strand +
CDS
GTGGCGACTAGCATTTCGCAGCGCTTTGAAAAAGCGGGTGACTTCTATCTGCTGGATGACGTGGATTTACGTGGTGGTTTTCGCGTTGTAACTTCCATCGCAGAACGTGATGCAATCCCGCTCCCGGCGCGTAAGCAAGGCATGGTGGTCCGCGTACTGGATAAAGTCGCAGGCACAACCGTAAACTATGAATTGCCTTTCGGTAAACCGATTACCAACGCCAACTGGATCGAATGGAAAGTTGGTGCCGGTGGGGATTTCATTCCAACCGCTGGCGGTAATCTGGACGGCGAGTTGAAATTGGGCGCAGCTGCAAGCTTCAATTTTGACGACGCACTGAAAGCAGAAATCGTAGATCGGAATTTGCTGTTTACCCCGGTCGGTACATTCGACCCGGATGATCCTGAGCCGCAGGGCCTTATGGCTTTCGGTAACGAAACAGAAAACACAATCGAAATCAATCCGTGGATTGGTCAGATCGTGTGTAAAACCGAAGTGGCGCTGGCATCTGACCGCTCGCTGAAAACGGACATTACTCGCATTGAAAACGCGATGAAAATTCTCCGTCGTATGCACGGCTACACGTTCCAGAAAATCGGCAATACCGACCGCATGTTTACTGGGTTGATCGCGCAGGAAGTTGCACAGGTTTTCCCCGAGGCGGTGTGCCATTCCACTGATGGAAAACTTGCGGTTTACTACGGCAGTTTGGCAGGGCTTTTCGTTGAGTGTTTGACTGACGTGGACGAACGCTTGATCGAGTTTGGCAAACGCCTTGACGCGCTGGAAGCAAAAGGCGAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
978ec7813d6519aba34712a6daa9ff469ebccd6b8224c6f30979db2c111a3b06
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50