Protein

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Genbank accession
XQU50146.1 [GenBank]
Protein name
baseplate protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MALFRIRQQGIDFQDGSRMTSLFDIIPKNTGMLIHASAAPTGWTKRTDNSFNNAALRIVSQTAWVPNTQTGRTAFTQAFKEHQKSHTITSTISGLSVGNHTLTTPEIPKHNHNIPNAGSGSGVANNTPSNQGGQRADMSDGTSGNRGSDSAHKHPVSYTSVSGPLTTNHNIAVRYVDVILCKYSGFEYSGNADSGS
Physico‐chemical
properties
protein length:196 AA
molecular weight: 20945,80630 Da
isoelectric point:9,41324
aromaticity:0,06633
hydropathy:-0,55765

Domains

Domains [InterPro]
DC_0698
STR
10–194
DC_0698
XQU50146.1
1 196
Architecture
STR
STR 10-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM2R
[NCBI] 		3400247 Viruses >
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU50146.1 [NCBI]
Genbank nucleotide accession
PQ898602 [NCBI]
CDS location
range 189571 -> 190161
strand +
CDS
ATGGCTCTCTTTCGTATTAGACAACAGGGAATTGACTTCCAAGACGGAAGTCGAATGACATCTCTGTTCGATATTATTCCCAAAAATACTGGAATGCTGATTCATGCTTCAGCAGCTCCTACTGGATGGACAAAGAGAACTGATAATAGTTTTAACAATGCTGCACTGAGAATTGTCAGTCAGACTGCTTGGGTACCTAACACTCAAACAGGCAGAACTGCATTTACTCAGGCTTTTAAGGAACACCAAAAATCACACACAATTACGAGTACAATTTCGGGATTATCGGTAGGTAACCATACCCTAACAACTCCTGAGATACCTAAGCATAATCATAATATACCTAATGCTGGTAGTGGTTCTGGTGTTGCTAATAACACTCCTAGTAATCAAGGTGGACAACGTGCTGATATGAGTGACGGCACATCAGGTAACAGAGGTAGTGATAGTGCTCATAAGCATCCTGTCAGTTATACATCAGTATCAGGTCCTCTTACTACAAATCATAATATCGCCGTTAGATACGTAGATGTTATTCTGTGTAAATATAGCGGATTTGAGTACAGCGGCAATGCTGATTCTGGATCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b2e09cfe55e414695322663a7c21a0e654fc8110d18ca78e8fe7d19d20f2b40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Unveiling a novel broad-host-range cyanophage cross-infecting Prochlorococcus and Synechococcus hosts Wei,S., Cai,L., Zhang,R., Xu,Y. and Li,J. 2025-12-09 — GenBank