Protein

View in Explore
Genbank accession
WVX92947.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAQDIKIYGSKGGQPKQHQPVEQPDNLISVNKVKVLLAVSDGEVDNSFSLKDLYLADVPVQNQNGTYNYEGVTAEFRPGTQSQDYIAGLEGANSEVQVNREISNSTPYIIAVNNTQLSAIRVKLFWPRLIKQENNGDLNGTSCEYAIDLSVDGATYTEYTRGVANGKTTSGYDRSIRVNLPAEFSSALVRVRKITADSESSTLVNDMQITTYQEVIDAKFRYPLTALVYVEFSSDLFPNGIPTISIKKRWKLIRVPTNYNPETRTYSGTWNGTFKMAYSNNPAWVLYDLVTNQRYGLDQRELGITIDKWGLYEAAQFCDQMVPDGKGGMEPRYLCDVVIQQKVEAYQVIRDICSIFRGLTFYDGEQIGIVVDKPRQPSYVFTNDNVVDGLFNRTFGSDKSLYTVANVQFDDVENSYQQDVEPVFELEATRRFGYNPVDLTAIGCTRRSEANRRGRWLLKTNLRSETVSFTTGLEGMIPMIGEVIAVNDQAWSSNYTLNLSGRIESVSGLQVFVPFKIDAAAGDRILINKPDGMPEYRTIASVSEDGMTLQLNTAFSFTPQPDTVFAIDKENLALQQYVVTGIQKADSDGDDAFGYTITAVEYDPNKYDEIDYGVNIQDRPTSIVEPDTLLAPENVQVSSYSKVVQGLSVETMIITWDKVQYAKTYTVQWRKENGNWINVPRTANTEIDIEGIYAGIYDVRVRSVSDTENVSAWSGIVTVSLTGKIGRPSAPTVITASTDEVFGIRVKWGFPEGSGDTAYTELQQVPDNGDGTYNPDNASLLTLLPYPAYEYWHTPIQPGKVIWYRARLIDRIGNTSDWSNFARGMSTDDANIINDFIKVDIEGSEGFKYLEQNAIQKNQDIQNQAEAIIENALANDGDVRRMTKENGKRKAEYVQAVNLIADETQARVEALTALKAQIDDEVVASITEVQTALATETEARTTADTTLSARLGENEAALNQKLDAFSNATSTGVQYGISLGLKYNGQTYSSGMSMELVGTGDNVRSQFIFDANRFAISNGIGSGSGQWQLPFVVENGNVIIKSAVIGDGSISNAKIGNFIQSNDWGTNSGWRLDKDDGLTLRGSDRGKMRVLDRNGVVRVKLGYLG
Physico‐chemical
properties
protein length:1105 AA
molecular weight: 122432,06060 Da
isoelectric point:4,71209
aromaticity:0,09321
hydropathy:-0,37321

Domains

Domains [InterPro]
DC_0014
STR
1–1104
DC_0014
IPR053171
Unmapped
6–886
IPR053171 Coil IPR015406
IPR055385
ATT
93–218
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
631–719
IPR036116
IPR003961
STR
631–725
IPR003961
WVX92947.1
1 1105
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-218 | STR 219-341 | ATT 342-489 | STR 490-1104 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX92947.1
1 1105
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,9394
Central domain 513 1083 572 0,0431
C-terminal 1084 1105 21 0,6870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-1083
C-terminal
1084-1105

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TR3
[NCBI] 		3117392 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX92947.1 [NCBI]
Genbank nucleotide accession
PP069512.1 [NCBI]
CDS location
range 10673 -> 13990
strand +
CDS
ATGGCGCAGGACATTAAAATTTACGGCAGTAAGGGCGGGCAACCGAAGCAGCACCAGCCTGTAGAGCAACCTGACAACCTAATATCTGTAAACAAGGTTAAGGTTTTACTGGCCGTTTCTGATGGCGAGGTCGATAATTCGTTCTCACTAAAGGATCTGTATCTCGCTGACGTTCCGGTTCAGAATCAGAATGGAACATACAACTACGAGGGTGTAACGGCAGAATTTCGCCCAGGCACACAGAGTCAGGACTACATTGCCGGGCTAGAGGGCGCGAACTCAGAGGTGCAGGTTAACAGGGAAATATCCAACTCAACACCTTACATCATTGCCGTTAACAACACTCAGCTATCAGCAATCAGGGTTAAGCTGTTCTGGCCTCGATTAATTAAACAAGAGAACAATGGCGACCTGAACGGAACATCTTGCGAGTATGCGATTGACCTGTCCGTTGATGGCGCTACATACACTGAATACACTCGAGGCGTGGCTAATGGCAAGACAACCAGCGGATACGACAGGAGCATTAGGGTTAATCTTCCTGCTGAGTTCTCGAGTGCGTTGGTGAGGGTTCGTAAGATCACGGCAGATTCAGAAAGTTCGACGCTGGTTAACGACATGCAAATTACGACCTATCAGGAAGTAATCGACGCCAAGTTCCGCTACCCACTTACAGCGCTGGTTTACGTTGAGTTTAGTTCTGACCTCTTCCCTAACGGAATCCCGACGATTTCAATCAAGAAGAGGTGGAAGTTGATTCGCGTTCCGACCAACTACAACCCAGAGACAAGGACTTATAGCGGAACCTGGAACGGAACATTTAAGATGGCTTACTCCAACAACCCAGCCTGGGTTCTTTACGATCTGGTAACGAATCAGCGTTACGGTCTGGACCAGCGTGAGCTTGGTATCACGATTGATAAGTGGGGTCTGTATGAAGCTGCGCAGTTCTGTGACCAGATGGTTCCAGATGGCAAGGGTGGGATGGAGCCTAGATACCTGTGCGACGTTGTTATTCAGCAGAAGGTTGAAGCGTATCAGGTAATCCGTGACATTTGCTCTATCTTCCGTGGGTTAACCTTTTATGATGGCGAGCAGATAGGGATTGTTGTCGATAAGCCACGCCAGCCTTCATACGTCTTTACCAACGACAACGTTGTTGATGGTCTGTTTAACCGCACGTTTGGTAGCGACAAGTCACTGTACACAGTCGCTAACGTTCAGTTTGATGACGTTGAAAACTCATACCAACAGGATGTTGAGCCAGTATTCGAACTGGAGGCAACAAGGCGTTTCGGTTACAACCCGGTTGACCTGACAGCCATTGGGTGCACTCGCAGGAGTGAAGCAAACCGCCGTGGTCGATGGCTGTTAAAGACAAACCTCCGCAGTGAGACAGTCAGCTTCACTACAGGTCTGGAAGGGATGATACCTATGATTGGTGAGGTGATTGCGGTTAATGACCAGGCCTGGTCTAGCAACTACACCCTCAACCTCTCTGGTCGCATCGAGTCAGTGAGTGGGTTACAGGTTTTTGTGCCGTTTAAAATTGATGCTGCTGCTGGCGACAGGATTCTAATTAACAAGCCTGACGGCATGCCTGAGTACAGGACAATTGCATCTGTATCTGAAGATGGAATGACGCTGCAACTTAACACAGCTTTTAGCTTTACTCCTCAGCCGGATACTGTGTTCGCGATTGATAAGGAAAATCTGGCGCTTCAGCAGTATGTTGTTACCGGGATTCAAAAAGCTGATAGCGATGGAGATGATGCTTTTGGCTACACGATTACGGCAGTTGAGTACGACCCGAACAAATACGACGAGATTGATTACGGCGTAAACATTCAGGACAGACCAACGTCAATCGTTGAACCAGATACATTACTGGCGCCAGAGAATGTTCAGGTGAGCAGCTACAGCAAGGTTGTGCAGGGTTTATCAGTTGAAACAATGATAATCACCTGGGATAAGGTTCAATACGCTAAGACCTACACAGTCCAATGGAGAAAGGAGAATGGAAACTGGATTAACGTACCGCGCACAGCGAATACAGAGATTGATATCGAAGGTATTTACGCAGGAATTTATGACGTTAGGGTTCGCAGCGTATCAGATACTGAAAACGTGTCTGCCTGGTCTGGTATTGTAACGGTATCGCTAACTGGCAAGATTGGTCGCCCATCGGCACCTACGGTTATCACGGCGTCAACTGATGAAGTATTTGGTATCCGTGTTAAATGGGGATTCCCTGAAGGCTCTGGCGATACTGCTTACACTGAGCTTCAGCAGGTTCCAGATAATGGTGATGGTACTTACAATCCTGATAATGCAAGTTTGCTTACGTTACTTCCTTATCCTGCCTACGAATACTGGCATACGCCAATTCAGCCAGGTAAGGTGATTTGGTATCGCGCAAGATTGATTGACAGAATCGGAAATACCTCTGATTGGTCTAATTTCGCAAGAGGCATGAGTACTGACGACGCAAACATTATCAATGATTTCATCAAGGTTGATATTGAAGGTTCAGAAGGATTCAAATACCTCGAGCAGAATGCGATTCAAAAGAATCAGGACATTCAGAATCAAGCTGAGGCAATTATCGAGAACGCACTGGCTAATGATGGCGATGTTCGCAGAATGACAAAGGAGAACGGCAAGCGTAAGGCTGAATATGTTCAGGCTGTGAATCTCATAGCCGATGAAACTCAGGCGCGCGTAGAGGCTCTAACGGCCCTTAAGGCGCAGATAGATGATGAAGTTGTAGCATCGATTACAGAAGTTCAGACTGCATTAGCCACAGAGACAGAAGCAAGGACTACTGCAGACACGACTCTATCAGCAAGACTTGGTGAAAATGAGGCGGCTTTAAACCAGAAGCTGGACGCATTCTCTAATGCCACATCGACTGGTGTGCAGTACGGAATTAGTCTTGGCCTGAAATACAATGGACAGACTTATTCATCCGGTATGAGCATGGAGCTTGTCGGCACTGGTGACAATGTTCGTAGTCAATTCATTTTTGACGCAAACAGATTCGCTATCAGTAACGGCATTGGTTCCGGCTCCGGTCAGTGGCAACTCCCCTTCGTTGTCGAGAATGGAAACGTAATCATCAAGAGTGCAGTTATCGGCGATGGCTCAATCAGTAACGCGAAGATTGGTAACTTTATTCAGTCTAATGACTGGGGTACAAATTCAGGCTGGAGGCTAGATAAGGATGATGGATTGACGCTTAGGGGTTCCGATCGTGGCAAGATGAGAGTCCTGGACCGGAATGGAGTGGTTAGGGTAAAATTAGGATACTTGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac801c807d488576b4265d39efd39afda1d29a5fddac5d36b3861b21ec006304
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7917
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50