Protein

Genbank accession
AFQ22525.1 [GenBank]
Protein name
putative tail tubular protein B [Pectobacterium phage PhiM1]
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MAFDGSIKSLLQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLADVPTTSQYDDHVFASYVDVQDTANHVIINTETGQLLVISEDFSTTLHNSTQQYLVASAASAIQTATLRGDLYIANTEKAPTKVFGSTTQQDPTKAGFYFVRTPALQKDYDITLSNSTGTYTYTYRTPTGTGTGDADLAKPSYIISDLLAKINAQTGTHGITATAYDAYMFLSSNTVSLSVTTNAGSTYATGSNQSRVSVVSDLPARLPAVGNGASVAVGTTERNFVWYQYDSATSVWKEAGAYGSPTGFSNMPIRISLDGVYTVETPAYEGRLAGSDETNEDPGFIDNGVTGFGAYQGRLVILAGPEVCMSAAGNPLRWYRSTVTALLTDDPINIFSGAATSTNFRHCVQFNKDLLLFARSCQAVVPSSNAAITPQTAQIVITSGYTTDTLAQPGVVGRSVLYSMPRTEHFAGVLEIIPSNTTDSQYTSNDITAHIPRYLPGRIRSIVSSTTSNSSAFICTGDSRSLFIQDYLWSGDEKVQSAWHQWTLPYPIVCTWFVRDRVYIGMRDGTTILVVTIEPQAGNTIDSYVRPFSDVYLRVTITDRQFALPTRLRAAVGSGEGLFITFADTSMGGMWVGYESIDPTTYVVTTVRNVPDGEYFVGLRYTSVLSPTPPLVRDANGIVIGTYQSLLVRYELTLKDSGEFHAIITDSSRTLTDGNYSSLVYSSTELLPNNPTDASLGRTIIPVRAQAQDTVATFEANADTDLCILDIEYVLQYRARRKRI
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84409,21960 Da
isoelectric point:5,16629
aromaticity:0,09536
hydropathy:-0,14253

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PhiM1
[NCBI] 		1211386 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFQ22525.1 [NCBI]
Genbank nucleotide accession
JX290549.1 [NCBI]
CDS location
range 26522 -> 28852
strand +
CDS
ATGGCCTTCGATGGCAGTATAAAGAGTCTGCTTCAAGGTGTCTCTCAACAGGTACCCCGCGAGCGCCTAGATGGACAAGTATCTGTACAGTTGAACCGTTTATCCGATGTGGTGAACGGTAACCGTAGACGCCCTGGTGCTAGGTACTTAGCAGATGTACCTACTACCTCACAGTACGATGACCATGTATTCGCCTCGTATGTAGATGTGCAGGACACAGCTAACCACGTTATCATTAATACTGAGACAGGGCAGCTACTAGTTATCTCCGAAGATTTCAGTACCACGTTGCATAATAGCACGCAGCAGTACTTGGTGGCTAGTGCAGCCAGTGCAATCCAGACTGCCACGCTCCGTGGTGATTTGTACATTGCTAATACCGAGAAGGCACCAACGAAGGTATTTGGTAGCACCACACAGCAGGACCCAACTAAGGCGGGTTTCTACTTTGTGCGTACCCCAGCCCTCCAGAAAGATTATGATATTACGCTTTCTAATAGTACTGGAACTTACACGTACACGTACCGCACACCGACAGGTACCGGTACGGGTGATGCAGACTTAGCTAAGCCTTCTTATATTATCAGCGATTTGCTGGCTAAGATTAATGCACAGACTGGTACACACGGGATTACAGCTACAGCGTATGATGCGTACATGTTCCTGAGTAGTAACACTGTCTCTTTATCTGTAACCACTAATGCTGGGAGTACTTACGCTACGGGTAGTAACCAGTCGCGTGTGAGTGTAGTATCTGACCTCCCTGCGCGTTTACCCGCTGTGGGTAATGGTGCGTCGGTAGCCGTGGGTACAACTGAGCGTAATTTTGTGTGGTATCAGTACGATTCCGCTACCTCCGTATGGAAAGAAGCCGGTGCGTACGGGAGTCCTACAGGCTTCTCAAATATGCCTATTCGTATCTCATTGGACGGTGTCTACACAGTAGAAACCCCAGCATATGAGGGCCGTCTGGCAGGTTCAGATGAAACCAACGAGGACCCCGGCTTTATTGATAATGGGGTAACTGGGTTTGGTGCGTACCAAGGCCGCTTAGTGATTCTAGCGGGGCCAGAAGTATGTATGAGCGCAGCAGGTAACCCATTACGTTGGTACCGCAGTACAGTAACCGCGTTGTTAACTGACGACCCTATCAATATCTTTTCAGGTGCTGCTACTAGTACTAACTTCCGACACTGCGTACAGTTCAACAAGGACTTACTCCTGTTTGCGCGCTCCTGTCAGGCTGTAGTACCCAGTAGTAATGCGGCTATTACTCCACAGACTGCCCAGATAGTAATCACGTCGGGTTATACTACCGATACTCTGGCACAGCCGGGTGTGGTGGGGCGTTCTGTACTGTACAGTATGCCGCGTACTGAACACTTTGCGGGTGTATTGGAGATTATTCCAAGCAACACCACAGACTCTCAGTACACCTCGAATGATATTACCGCCCATATCCCAAGGTACTTGCCGGGGCGCATCCGTAGTATTGTATCTAGTACCACTAGCAACTCCAGTGCATTCATTTGTACAGGGGATAGTCGTAGCCTGTTCATTCAGGACTACCTGTGGTCTGGTGATGAGAAGGTACAAAGTGCATGGCACCAGTGGACTTTACCATACCCTATTGTGTGTACATGGTTCGTTCGTGACCGTGTGTACATCGGTATGCGGGATGGTACCACTATCCTAGTGGTAACGATTGAACCACAGGCGGGTAACACGATAGACAGCTATGTACGTCCGTTCTCTGATGTGTACCTACGGGTCACTATCACCGATAGGCAGTTCGCCCTACCTACCCGTTTACGCGCCGCAGTGGGTAGCGGAGAAGGTCTGTTCATTACCTTTGCTGATACCAGTATGGGTGGAATGTGGGTGGGGTACGAGAGTATCGACCCAACGACGTACGTAGTAACTACAGTACGTAATGTTCCCGATGGTGAGTACTTCGTAGGGTTAAGATACACTAGTGTACTCAGTCCAACACCACCATTAGTACGAGATGCTAACGGTATTGTTATTGGAACATACCAATCATTACTGGTGCGGTACGAGCTTACGCTGAAAGATTCAGGAGAGTTCCACGCTATTATTACCGATAGTTCTCGTACCTTAACGGATGGTAACTACTCCAGCCTAGTGTACAGTAGCACTGAGTTACTACCAAACAATCCAACCGATGCTTCACTAGGTAGGACTATTATACCGGTACGTGCTCAAGCGCAGGATACTGTGGCTACCTTTGAAGCTAATGCTGATACCGACTTATGTATCTTAGATATTGAGTACGTCCTGCAATACAGGGCACGGAGGAAAAGAATATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8VBX
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB

Literature

No literature entries available.