Protein

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Genbank accession
AUR85726.1 [GenBank]
Protein name
double jelly roll capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAFRSNKILPNFNGVGAGQTATLDVPIGSTYHQIAFEFSGMTTAQLTNFKVLLNGIPHIEIPSVAVLEQLNAFNGRGTTAGIFQLDFERFGLLTRQARELTAIGTGLGNSDPNQVRTFQIQVDIAAGASSPSLKATATTSPASFAGLVKKIRLFNRNPTGAGLFEISDLPKGDIINKVYFQSGEAASQIKKLTLEIDNYVKFERSNTLNNAIQKDDGVRVPQAKYSVFDPTELGYGAETVDTRYPMVEGNPRSGQNVSDMRFKLDMDGADNMLLLVEYLGTVER
Physico‐chemical
properties
protein length:284 AA
molecular weight: 30878,57750 Da
isoelectric point:5,80317
aromaticity:0,08451
hydropathy:-0,18768

Domains

Domains [InterPro]
IPR053751
STR
3–143
IPR053751 IPR053751
IPR041377
ATT
9–139
IPR041377 IPR057915
AUR85726.1
1 284
Architecture
ATT
STR
ATT 3-143 | STR 147-284
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.080.O._10N.286.48.A4
[NCBI] 		1881315 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85726.1 [NCBI]
Genbank nucleotide accession
MG592455 [NCBI]
CDS location
range 5696 -> 6550
strand +
CDS
ATGGCTTTTCGTTCAAATAAAATTTTACCCAATTTCAACGGCGTAGGCGCGGGTCAAACCGCTACACTAGACGTTCCAATTGGTTCGACTTATCACCAAATCGCGTTCGAATTTTCTGGAATGACTACCGCGCAACTAACAAACTTTAAAGTTTTGTTGAACGGTATCCCACACATCGAGATTCCGAGTGTAGCGGTTCTAGAACAACTAAACGCTTTTAACGGTCGCGGCACCACTGCGGGTATTTTTCAACTCGACTTTGAACGTTTTGGATTGCTAACTCGTCAAGCTCGCGAGCTAACCGCTATTGGGACAGGCTTGGGTAATAGCGACCCGAATCAGGTTCGTACGTTCCAAATTCAAGTCGATATCGCGGCGGGCGCTTCGTCACCTAGTCTAAAGGCTACAGCGACAACTTCGCCTGCGTCTTTTGCTGGTCTGGTTAAAAAGATTCGTCTCTTCAACCGTAACCCGACGGGCGCAGGCTTGTTCGAAATTTCGGATTTACCTAAAGGCGACATTATCAACAAAGTGTATTTTCAATCTGGTGAAGCAGCTTCGCAGATTAAAAAGCTTACACTCGAAATTGATAATTACGTTAAATTCGAGCGTTCAAACACACTAAACAACGCTATCCAAAAAGATGATGGTGTACGTGTCCCTCAAGCAAAGTATTCAGTTTTTGACCCCACAGAGCTAGGTTACGGAGCGGAAACCGTTGATACGCGCTATCCGATGGTCGAAGGTAACCCTCGAAGCGGTCAAAACGTTTCGGATATGCGCTTTAAGTTGGATATGGACGGCGCTGATAACATGCTTTTACTCGTTGAGTATCTTGGTACGGTTGAGCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
260b1abef9cf0042fa3f7c85c228033922f1c015b0bb8878e14424fb14417c94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8799
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank