Protein

View in Explore
Genbank accession
XOD41095.1 [GenBank]
Protein name
long tail fiber hinge connector
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAFIDNTKRMAYFDEDSFTTQNMSENNAVKYRLRLKGSNNNSTSPSPAVFINNTSQLRFAPGRGLTTVIFDSNMQYVAEKTFDTFGDTANACNSCMIYMDSFGPGFIIAAVSRDAIRSSLAFDEYMAKKGSKSWPGTELLGKFYRSSAVFLYNTTQQQILSEGYQLTVAQNGDTSVTMDFVYDTIDDLGATGLSQFAVSDPNEYDVNNYNGPVFVEQPLTELNLAKGNILLCSYDLYTPKSVWDAGGKSRLSINYLKGTTWVSGDAKMNTKPDTWERFEFYTTIPNSDINTLQVKAFRYPSSVTTGIVKVKNVSVSKALRTDKVIGNAAIGVYGARMNKAAEIPMPPAGSRKARLLNLVVKDNPGKVFDLESTNFKEFQ
Physico‐chemical
properties
protein length:379 AA
molecular weight: 41968,78970 Da
isoelectric point:7,54034
aromaticity:0,11346
hydropathy:-0,32665

Domains

Domains [InterPro]
DC_0912
STR
2–379
DC_0912
PS52031
LEC
27–197
PS52031
XOD41095.1
1 379
Architecture
STR
STR 2-379
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD41095.1
1 379
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1123
Central domain 11 214 205 0,4920
C-terminal 215 379 164 0,6309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-214
C-terminal
215-379

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage WSPA
[NCBI] 		3384840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD41095.1 [NCBI]
Genbank nucleotide accession
PQ600363 [NCBI]
CDS location
range 128926 -> 130065
strand -
CDS
ATGGCATTCATAGACAATACTAAAAGAATGGCATATTTTGATGAAGATTCATTTACAACTCAGAATATGTCAGAAAACAATGCAGTCAAATATAGATTGCGTTTAAAAGGATCAAACAATAACAGCACTAGTCCATCTCCTGCTGTTTTCATTAACAATACTAGTCAGCTTCGATTTGCTCCAGGTCGTGGATTAACAACTGTAATATTTGATTCAAATATGCAGTACGTAGCCGAGAAGACATTTGATACATTTGGTGACACTGCTAACGCATGTAATAGTTGCATGATCTATATGGATTCATTTGGTCCTGGATTTATCATTGCAGCTGTTAGTCGTGATGCAATTAGATCGTCTTTAGCATTTGATGAGTATATGGCTAAAAAAGGATCTAAGTCATGGCCTGGTACAGAGCTATTAGGTAAGTTCTATCGTTCATCTGCTGTATTTTTGTACAACACAACTCAACAGCAGATTTTATCTGAAGGCTATCAATTAACTGTGGCTCAAAATGGCGATACAAGTGTCACTATGGATTTTGTATACGATACGATTGATGACCTAGGCGCTACAGGATTGTCTCAGTTCGCGGTCAGTGATCCTAATGAATATGATGTAAATAACTATAACGGTCCTGTTTTTGTTGAGCAGCCGCTCACAGAGCTTAACCTGGCTAAGGGAAACATACTACTTTGTTCATACGATCTTTATACTCCTAAAAGTGTTTGGGACGCAGGTGGTAAATCAAGGTTGTCGATTAACTATCTAAAAGGAACTACTTGGGTCTCTGGCGATGCCAAAATGAATACTAAGCCTGACACATGGGAACGGTTTGAATTCTATACTACAATCCCTAACAGCGATATCAATACTTTACAAGTGAAAGCATTTAGATATCCTAGCTCAGTGACAACAGGTATTGTTAAGGTCAAGAACGTTTCGGTGTCTAAAGCTTTACGTACAGACAAAGTCATTGGTAATGCTGCTATAGGTGTCTACGGCGCAAGAATGAATAAAGCAGCAGAAATACCTATGCCTCCAGCTGGTTCTAGAAAAGCAAGACTCTTGAACTTAGTAGTCAAAGATAATCCAGGTAAAGTCTTCGACCTTGAAAGTACTAACTTTAAAGAATTCCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2189af6cd660574e7c80292eccc4801e728df380229bc3d127d279095e40fdea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50