Protein

View in Explore
Genbank accession
QIG74759.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALAAQKIIVRIGMSEEVPGMDPGEMGWDMDLARLRVGDGSPNPTYVMTNKSKGPFEYNFIQYAQYPEIRMLPEGTVDGVDISDLNRENGLVTRIGDNLWAHRTIVNTDGYVEVTFGDGVAGNPTINFSHDFTVEIGEFLKTVAVDDITIHGDGRVVNPLFAQIATFTLRGVIRIATLAEVNAGVDTTTAVCPAYLKNYVTNNSKKFGAILKTGNIYTFPANQDSGSLSLAGYTCAVVVVSGGGDIIDGGTIRLRIGSVTFAPPSQFLGDNPAVSSFSAGSGGSFSGASQFAMFKSGGVWYATFNGVAFVVGSGDSFTWGKDDGTQGSVAAGTPVGF
Physico‐chemical
properties
protein length:337 AA
molecular weight: 35510,45590 Da
isoelectric point:4,69248
aromaticity:0,10089
hydropathy:0,05727

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG74759.1
1 337
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,9660
Central domain 71 269 200 0,0735
C-terminal 270 337 67 0,9653
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-269
C-terminal
270-337

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I42
[NCBI] 		2509736 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74759.1 [NCBI]
Genbank nucleotide accession
MN988540 [NCBI]
CDS location
range 59559 -> 60572
strand -
CDS
ATGGCACTAGCGGCACAAAAGATCATCGTTCGGATTGGTATGTCGGAAGAAGTTCCCGGCATGGACCCCGGCGAAATGGGTTGGGATATGGACCTTGCACGCTTGCGCGTTGGCGACGGTTCCCCCAATCCTACCTACGTCATGACGAACAAGTCGAAAGGCCCGTTCGAATACAACTTCATCCAGTATGCGCAGTATCCGGAAATCCGGATGCTACCAGAAGGCACGGTCGATGGCGTCGATATCTCCGATCTCAATCGCGAGAACGGTCTGGTAACACGCATCGGTGATAACCTTTGGGCGCATCGCACCATCGTCAATACCGATGGCTACGTGGAAGTCACGTTCGGCGATGGCGTCGCTGGTAATCCTACCATCAACTTCTCGCACGATTTCACGGTCGAGATTGGCGAATTCCTCAAGACCGTAGCCGTTGACGATATTACCATCCACGGTGATGGCCGTGTCGTCAATCCGCTGTTTGCACAGATCGCAACGTTCACGCTGCGCGGTGTCATCCGTATCGCTACGTTGGCCGAAGTCAACGCGGGCGTCGATACTACCACGGCAGTTTGCCCGGCGTATCTCAAGAACTACGTTACGAACAACTCGAAGAAGTTCGGCGCGATCCTCAAGACCGGCAACATTTATACCTTCCCGGCGAACCAAGACAGCGGTAGCTTATCCCTTGCAGGATATACTTGCGCTGTAGTGGTGGTAAGTGGTGGCGGTGATATCATTGACGGTGGCACCATTCGCTTGCGCATCGGCAGCGTCACTTTCGCGCCGCCGTCTCAGTTCCTTGGTGATAACCCTGCCGTAAGCTCGTTTTCTGCCGGTTCTGGCGGATCGTTTTCCGGCGCATCGCAGTTCGCCATGTTCAAATCTGGCGGCGTTTGGTATGCCACGTTCAACGGTGTGGCGTTTGTTGTCGGCTCTGGCGATTCTTTCACATGGGGTAAAGACGACGGCACGCAAGGTTCCGTTGCTGCCGGAACGCCGGTAGGATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a739d79987ae36b22182372adc2981b7b1291648e793ce02fae1748158b31710
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank