Protein

View in Explore
Genbank accession
QZI79033.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MAAGTLSVTNNSTAVTGDGTTLTALKAGDFLSLVVGQVPYTIAIASIESDTALTLALPFDGPTATGLAWDSVARDTMSLATMGVTVQAQKALRLMIADENNWRAIFGDAEEVTVTLPNGQVMQGMSWGYLSSLLKEVDPVEMRDLQQQAAASEAAALVSRNEAEGFKNDANAIKTQTDQIKTDTQAIHDATNTIKTQTDQIKTDTQSIKDQTDQIKTDTGVIRDEANTAKTDAQAASTAAQGFRDQAEEWAQSVNADNLLTKSGNLAGVADVQTSRTNLELGEGNEPIFKGALAVKSAPDTVSAQGGMFQSKLKNSNGEDVVATQSYAETQLGTGKHTIGVITPSGAHYYQLDVEGNFNGFKRLSSAQGGELLLNGVDSNTVQLLSLNPPKPNDYTGFTRYNWQNSAVFTGPIRQGGTGLEAYEVYVLNAGVAEWRYRFRPDGKMSARRLIAEGFQTGWDQPNNYGDSGVWLSDVGNNDGGWVPAISWQSQSTGGYPIRATWGLISQGTANWPRAALRCRGDGENWTNFEFVVNSCDIQVSGTFGAYTFSKAPTSDRDLKHDIKYTEGKESYDRVMQWLPTMFKYKGSEIQRYGLIAQDLVKIDPQYVKIIPGALKNPDLVGTEGFKAEDGDYYDDTLALDSNVMLTDMACAMVFMGRKVEDMQKELEELKAAVAALTKA
Physico‐chemical
properties
protein length:680 AA
molecular weight: 73501,92580 Da
isoelectric point:4,67918
aromaticity:0,07941
hydropathy:-0,37956

Domains

Domains [InterPro]
DC_0162
STR
1–415
DC_0162 DC_0971
IPR030392
CHP
555–667
IPR030392
IPR030392
CHP
555–609
IPR030392 Coil
QZI79033.1
1 680
Architecture
STR
RBD
STR 1-415 | RBD 418-680
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-101114B2
[NCBI] 		2865791 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI79033.1 [NCBI]
Genbank nucleotide accession
MZ234014.1 [NCBI]
CDS location
range 26848 -> 28890
strand +
CDS
ATGGCAGCGGGTACACTATCCGTAACGAATAACAGCACCGCGGTGACTGGAGACGGCACAACGCTTACCGCGCTGAAGGCTGGCGACTTCCTGTCGCTGGTAGTAGGGCAAGTCCCTTACACTATTGCTATTGCATCCATTGAGAGCGACACCGCGCTTACACTGGCGCTGCCGTTCGATGGCCCAACGGCAACCGGCCTCGCATGGGATAGCGTGGCGCGCGATACCATGTCCCTTGCAACGATGGGCGTAACCGTCCAGGCGCAGAAAGCACTACGCTTGATGATCGCGGATGAAAACAACTGGCGTGCAATCTTCGGCGACGCTGAAGAAGTCACGGTAACGCTGCCAAACGGGCAAGTTATGCAGGGAATGTCATGGGGCTACCTGTCATCCTTGTTGAAGGAAGTAGACCCCGTCGAAATGCGCGACCTGCAACAACAAGCCGCCGCATCGGAAGCCGCCGCGCTGGTGTCGCGCAATGAGGCCGAAGGCTTCAAGAACGATGCCAATGCCATCAAGACGCAGACCGACCAAATCAAGACTGACACGCAGGCAATCCACGACGCCACCAATACGATCAAGACGCAGACCGACCAGATTAAGACCGATACGCAGTCTATCAAGGACCAGACCGACCAGATTAAGACGGATACTGGCGTTATTCGCGATGAAGCCAATACTGCGAAGACTGACGCGCAAGCCGCCAGCACTGCCGCGCAGGGATTTCGCGATCAGGCCGAAGAATGGGCGCAAAGCGTAAACGCGGATAATCTGCTAACTAAATCCGGCAACCTTGCAGGCGTTGCCGATGTGCAGACGTCGCGCACCAACCTCGAACTGGGGGAGGGTAACGAGCCTATTTTTAAGGGTGCTCTCGCTGTTAAATCAGCCCCCGACACCGTATCGGCACAGGGCGGAATGTTCCAGTCTAAGCTAAAGAATAGCAACGGTGAGGACGTGGTAGCGACGCAAAGCTACGCAGAAACACAACTAGGGACCGGAAAGCACACGATCGGCGTAATCACGCCTTCGGGGGCACATTACTATCAACTCGACGTCGAAGGTAACTTTAACGGATTCAAGCGCCTGTCGTCTGCGCAGGGTGGCGAATTACTTCTGAACGGCGTCGATAGTAACACCGTGCAGCTACTGTCGCTTAACCCACCAAAGCCGAACGACTATACCGGATTCACGCGGTATAACTGGCAAAATAGCGCGGTGTTTACCGGGCCGATTCGTCAGGGAGGGACGGGGCTTGAAGCCTATGAGGTCTACGTCCTGAATGCTGGCGTGGCGGAATGGCGCTACCGGTTTAGACCCGATGGAAAGATGTCCGCCAGACGACTTATCGCCGAAGGTTTCCAGACCGGCTGGGACCAGCCTAACAACTACGGGGACAGCGGTGTGTGGCTATCTGACGTCGGAAATAACGACGGCGGCTGGGTTCCTGCAATCTCCTGGCAGTCCCAATCAACCGGCGGTTACCCTATCCGCGCCACGTGGGGGCTTATCTCTCAGGGCACGGCGAACTGGCCCCGTGCGGCATTGCGATGCCGAGGGGATGGCGAAAACTGGACAAACTTCGAGTTCGTCGTTAACAGTTGCGATATCCAGGTCAGCGGTACATTCGGCGCGTACACATTTTCCAAAGCGCCTACGTCCGACCGTGACCTGAAGCACGATATTAAGTACACGGAAGGGAAAGAAAGCTACGATCGAGTGATGCAGTGGCTTCCCACAATGTTTAAGTATAAAGGGTCGGAAATCCAGCGCTATGGCCTTATCGCGCAGGACCTGGTGAAAATCGATCCGCAATACGTGAAGATTATCCCCGGCGCACTTAAAAACCCGGACCTCGTAGGGACTGAAGGATTCAAAGCCGAAGACGGCGACTACTACGACGACACGCTGGCACTTGACAGCAACGTCATGTTAACAGATATGGCGTGCGCGATGGTCTTCATGGGGCGTAAAGTGGAAGATATGCAGAAAGAACTGGAGGAATTGAAAGCTGCCGTAGCGGCACTGACCAAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ff2c61cce6d15471b36db011fcc88a32a0e1ecfe02b1bf0c7b7bb3c7399a5aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank