Protein

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Genbank accession
AXY81717.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSLVQLIDSTVGLRNELTQPDGAYLTGLGASTVGALLDTTRKLSYYGNNRQALIDLLLHAKVTGGPIDIDVPVLIDTPINMDFEYTPLIMSCSSGRLLSDTTALVLNRLGYGSTINNFDMWNVTAPWAITRWGSTGDWNTSEEAVASLRQTNDLHYYQPTVNDADVWSALTPEQQNQNISPKLEVHNSDGVVLNTPRGRYALYEFYGCNYCRVFNPNLSGGKGVLGTIVFNNTNATAYGIDNWVVGGDDIRNGSFSGVVHLRNKRGGAINCSPYRSGESGIKTYQNELNGVSARCYEMTYTNCHVKQACYDGLDLASDYGAVSERVADLSLAEAPWQELPTKHTVIGCSGFNCGGNALHIDGTGNTVIGMKASLSGLSGVHDDGTRSVYNDVVSVNNARNNISHQVTLSKSQVINGITLVLDAATGTNFGYGVYAPLSNTKGMDTSLVASGTVIPFIVKAQTTADGDLTVGHSAAPDRICRVLGNPELGLTSTPIMALTSLATGTPSAPSGNVYLNSHYLGSEVPGFQVLGVSGGGGLVSTLNSAYATQVGNSQASFVFHGSSLSIVARDAAGVLRQYALTGVPV
Physico‐chemical
properties
protein length:585 AA
molecular weight: 61912,48380 Da
isoelectric point:5,34249
aromaticity:0,07521
hydropathy:-0,06530

Domains

Domains [InterPro]
IPR012332
STR
39–580
IPR012332
IPR012332
STR
40–580
IPR012332
IPR015331
RBD
79–443
IPR015331
IPR011050
STR
81–442
IPR011050
AXY81717.1
1 585
Architecture
STR
STR 39-580 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY81717.1
1 585
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,9827
Central domain 51 466 417 0,9831
C-terminal 467 585 118 0,9067
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-466
C-terminal
467-585

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Gaspode
[NCBI] 		2320194 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
cfb6437dcdc40e8735b1be4bb1091439fad5bde811dbdac464ec8c6f7fe49fb2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6088
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50