Protein

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Genbank accession
YP_007672659.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAAINQRIPNFLGGVSQQPDSIKFPGQLRACDNAVPDVTFGLMKRPPGEFVKTLTSATDDGYWYEILRDGDEKFLVQMTAATSYTGTKPIRIWNLLTGVEQTLTNADGDTLFHYMHQTTAGGNTIKPYGVQTIQDYTLICNPQKTISTLGNTHSPLNSGDYAFARLDTIAYNTEYVLYTGSAPAANTYYRVTSLKVDYTGTRNGTMQGATWDDANEDGRYAGQIEFSMSSGGQNIWLHVANSQDIEGTLLVNGQTYIDSQNPQYQGESSGSTSGSGNGSDFIGYTSDYNTRYSATVTLKNGGLIFNTNKLSAMETYIDIELEGKWYRIHVEGVEPVETYQGVSGIAYFKTAQSPDKGRASMATILKGLESAVNNDLADVTAEIYGSGLYLYGTAAPNVNFLGGAVNEAMNVFGNTAQDVSRLPSMCKHGYIVQVANSENLDADNYYVKFIADNGSGGSGKWEETVRPHNFSSGSDPMVKGFNDATMPHALVNNRDNTFTFKKLDEATANTDGNDNYWKYREVGDDETNPFPSFNGKNIQKIFFHRNRLGMIADEQVVMSRPGDYFNFFVVSAITISDDNPVDITVSDIKPAFINHVLPIQKGVMMFSDNGQFILFTESDIFSPKTARLKKISSYECDDALQPVDMGTSVMFSSGVSAYTRTYEATVVDDDIPPKIVEQTRVVPEYVPKDVNVIANTTALGIVSYGTKGSPRVFHYKYFDAGERRDQSAWYSWSLTGHLQHMVYTAGSYYVVTKINNDFVLCRHEYVTDTTGTRSYTVGGLETNVGSPYHTARWFEPCLDCLVVPSAITYTAAGGGNIEKTVLTLPYTPLSTDTNFYAVGLNGTNAGVVVTADSVGTNSATFNGINMTGWEVVVGYNYTTLVELPDYHFTLEANRYDTDGSLRISGMNFDLGVSGPMEFHLTAKNSYTDANGTVTPEFDDYIQYESGMQTGLANFGTVPSALNKTVRVPIQKKNTKYNLQIKVTDPFSTALISASWDGIYNQRRHARK
Physico‐chemical
properties
protein length:1007 AA
molecular weight: 110725,71750 Da
isoelectric point:4,97355
aromaticity:0,11221
hydropathy:-0,35720

Domains

Domains [InterPro]
IPR058003
TTP
1–185
IPR058003 DC_0058
DC_1518
ATT
183–322
DC_1518 IPR058003
YP_007672659.1
1 1007
Architecture
TTP
ATT
STR
TTP 1-182 | ATT 183-322 | STR 323-1007
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007672659.1
1 1007
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,8142
Central domain 143 374 233 0,9060
C-terminal 375 1007 632 0,3764
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-374
C-terminal
375-1007

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP10
[NCBI] 		885867 Uroviricota > Caudoviricetes > Autographivirales > Tangaroavirus > Tangaroavirus PSSP10
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007672659.1 [NCBI]
Genbank nucleotide accession
NC_020835 [NCBI]
CDS location
range 11605 -> 14628
strand -
CDS
ATGGCAGCAATTAATCAACGAATACCAAACTTTTTAGGAGGTGTATCTCAACAGCCTGATTCAATTAAATTTCCAGGGCAGCTTAGAGCATGTGATAACGCAGTACCTGATGTAACCTTTGGCTTAATGAAACGTCCTCCAGGAGAATTTGTGAAGACGTTGACTAGTGCTACTGATGATGGTTATTGGTATGAAATCCTAAGAGATGGGGATGAAAAATTTTTAGTACAGATGACAGCTGCTACTAGTTATACTGGTACTAAACCTATACGTATTTGGAACCTTTTAACTGGAGTAGAGCAAACCCTTACCAACGCTGATGGTGACACTTTGTTTCACTATATGCACCAAACAACTGCAGGTGGAAACACTATTAAACCTTATGGTGTTCAAACCATACAAGATTACACACTTATTTGTAACCCGCAAAAAACAATTAGTACTCTAGGTAATACTCACAGCCCTCTTAATAGTGGTGATTACGCTTTTGCTAGATTAGATACTATTGCTTATAACACAGAGTACGTATTATATACAGGCTCTGCACCTGCTGCTAATACTTACTATCGAGTGACTTCTTTAAAAGTAGACTACACTGGAACTAGAAATGGTACTATGCAAGGTGCTACTTGGGATGATGCAAATGAAGATGGTAGATATGCTGGTCAAATAGAGTTCTCAATGAGTTCAGGTGGACAGAATATCTGGTTGCATGTAGCAAACTCACAGGATATTGAAGGTACTCTTTTAGTTAATGGTCAAACATATATAGACTCACAAAACCCACAATACCAAGGTGAGTCTTCTGGTTCAACATCTGGTTCAGGTAATGGATCTGACTTTATTGGTTATACTTCTGATTACAATACACGGTATTCCGCTACAGTTACTTTAAAAAATGGTGGTCTTATTTTTAATACCAACAAACTTAGTGCAATGGAAACGTATATTGATATTGAATTAGAAGGTAAATGGTATCGTATTCATGTAGAAGGTGTAGAACCTGTTGAAACTTATCAAGGTGTTAGTGGTATTGCATATTTTAAAACAGCACAAAGTCCAGATAAAGGTAGAGCTAGTATGGCTACTATTCTTAAAGGATTAGAATCTGCTGTTAATAATGATTTAGCTGATGTTACTGCTGAAATATATGGTTCAGGTTTATATTTATATGGTACTGCAGCTCCTAATGTAAACTTTTTAGGAGGTGCTGTAAATGAAGCTATGAATGTGTTTGGAAACACAGCACAAGATGTATCTCGTTTACCATCTATGTGTAAACATGGATATATAGTACAAGTAGCTAATTCAGAAAATCTAGATGCCGATAATTATTATGTAAAATTTATAGCGGATAATGGGTCAGGTGGTTCAGGTAAATGGGAAGAAACTGTAAGACCACATAACTTTTCATCAGGCAGTGATCCTATGGTTAAAGGATTCAATGATGCTACGATGCCACACGCTTTAGTTAACAATCGTGACAATACATTTACTTTTAAAAAGTTAGATGAAGCCACCGCTAATACTGATGGTAATGATAACTACTGGAAATACAGAGAAGTCGGTGATGATGAAACTAACCCATTCCCTAGCTTTAATGGTAAAAATATTCAGAAAATATTTTTTCACAGAAATAGGTTAGGAATGATTGCTGATGAGCAAGTAGTGATGAGTCGTCCTGGAGATTACTTTAATTTCTTTGTTGTCTCTGCGATTACTATAAGTGATGATAACCCTGTTGATATTACAGTATCGGATATTAAACCTGCATTTATTAATCATGTACTCCCTATACAAAAAGGAGTAATGATGTTCAGTGATAATGGGCAATTTATACTATTTACTGAATCTGATATATTTAGTCCTAAAACAGCAAGGCTTAAAAAGATATCTAGCTATGAATGTGATGATGCTTTACAGCCTGTAGACATGGGAACTTCAGTTATGTTCAGTTCAGGTGTATCTGCATACACTAGAACATATGAAGCGACTGTTGTAGACGATGATATACCTCCAAAAATAGTAGAACAGACACGAGTAGTACCTGAATATGTACCAAAAGATGTTAATGTTATAGCTAATACAACTGCTTTAGGTATTGTTAGTTATGGTACCAAAGGGTCACCTCGGGTTTTCCATTATAAATATTTTGATGCTGGAGAACGGAGGGATCAATCTGCTTGGTATAGCTGGAGTTTAACTGGTCATTTACAACATATGGTGTACACTGCTGGTAGTTATTATGTAGTAACTAAAATTAATAATGACTTTGTACTATGTAGACATGAGTATGTAACAGATACGACAGGTACAAGAAGTTATACGGTAGGAGGTTTAGAAACTAATGTAGGTTCACCGTATCACACAGCTAGATGGTTTGAACCTTGTTTAGACTGTTTGGTAGTACCATCAGCTATAACATATACTGCAGCTGGAGGTGGTAACATAGAAAAAACAGTTTTAACTTTACCTTATACTCCTCTATCTACTGATACTAATTTTTACGCAGTTGGTTTAAACGGTACTAACGCAGGTGTGGTTGTCACAGCTGATTCTGTAGGTACTAATAGCGCTACCTTTAATGGTATCAATATGACTGGATGGGAGGTAGTTGTAGGTTATAATTACACTACTCTAGTTGAACTACCAGATTATCATTTTACGCTTGAAGCTAATAGATATGATACAGATGGTTCATTAAGAATCTCTGGTATGAACTTTGATTTAGGTGTATCTGGTCCTATGGAGTTCCATCTAACAGCTAAAAATTCTTATACCGATGCTAATGGGACTGTAACACCTGAGTTTGATGATTACATTCAATATGAATCAGGTATGCAAACTGGTTTAGCTAACTTTGGTACTGTACCTTCAGCACTTAATAAAACTGTTCGAGTACCTATACAAAAGAAAAACACTAAATATAATTTACAAATAAAAGTAACTGATCCTTTTTCCACCGCTTTAATCTCAGCAAGCTGGGATGGCATTTATAACCAACGAAGACATGCACGAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c72dc7b8218a4c597f031132a0cd6380aa1ce5809f9b562f7a19aa7b73675a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank