Protein

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Genbank accession
AUR88281.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSKIIYGTIATAVGLRKLNTASLAGSKVEITKVKYGDSSGIEYQPTGDELDIKNTVYESKVNSVNVDDLNPNWVNIESVIPSNIGGFWVREMGLYDESGDMIFITAVSPREKPVGQPQSIDMSFDIIVETINPDTLKVFFDPNKAIASQSFVEKLMSDYIKTRVGEIAYFHDANHRPEYLNLDGSEILRSEEPTLWGYAQSSGLMISQADKDSDKMRYAMHFGSGDGALTFTLPNHHLGHFLRGNPEGVEHGETQGDAIRNITGFIDTNADIFSEGVSGAFRHGPGDTEKYLSSKVNVDTNFGSVIFDASTVVPTANENRPYTANLSVRIHRGRV
Physico‐chemical
properties
protein length:335 AA
molecular weight: 36854,67430 Da
isoelectric point:5,01390
aromaticity:0,08955
hydropathy:-0,34955

Domains

Domains [InterPro]
DC_1371
STR
1–228
DC_1371
IPR051934
Unmapped
6–153
IPR051934 SSF88874
IPR022225
ATT
6–149
IPR022225 DC_1811
AUR88281.1
1 335
Architecture
ATT
STR
ATT 1-149 | STR 150-333 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88281.1
1 335
Domain Start End Length (AA) Confidence
N-terminal 1 318 318 0,5156
Central domain 319 324 7 0,0028
C-terminal 325 335 10 0,9967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-318
Central
319-324
C-terminal
325-335

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.111.B._10N.286.45.E6
[NCBI] 		1881329 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88281.1 [NCBI]
Genbank nucleotide accession
MG592485 [NCBI]
CDS location
range 16648 -> 17655
strand +
CDS
ATGAGTAAGATCATATATGGCACCATCGCAACAGCGGTAGGGCTAAGAAAACTAAACACAGCATCGCTCGCAGGTTCTAAGGTTGAAATAACCAAGGTTAAGTATGGGGATTCTAGCGGGATCGAGTACCAACCAACAGGCGATGAGCTTGATATAAAAAACACAGTCTACGAGTCAAAGGTAAACTCTGTAAATGTAGACGATCTAAATCCTAATTGGGTAAATATAGAATCAGTCATACCTTCTAATATTGGCGGGTTCTGGGTTCGTGAAATGGGCCTTTACGACGAAAGTGGAGATATGATTTTTATCACCGCAGTTTCGCCAAGAGAAAAACCAGTTGGACAACCTCAGTCGATAGATATGTCATTCGACATAATTGTCGAGACTATCAATCCTGACACGCTTAAGGTTTTCTTTGACCCTAATAAGGCTATAGCCTCGCAAAGTTTTGTTGAAAAGCTGATGTCTGATTACATAAAAACAAGGGTAGGTGAAATTGCGTATTTCCATGACGCAAACCATAGGCCTGAATATCTAAATCTTGATGGTAGTGAGATTTTAAGATCTGAAGAGCCTACGCTTTGGGGCTATGCTCAGTCGTCCGGATTGATGATTTCTCAGGCCGATAAGGATAGCGATAAGATGCGTTACGCCATGCACTTCGGCAGTGGAGATGGCGCTTTGACGTTCACGCTCCCTAATCATCATCTAGGGCATTTTTTGCGAGGAAACCCGGAAGGTGTTGAGCACGGGGAAACTCAAGGTGATGCAATTAGGAACATTACCGGATTTATTGACACCAACGCCGATATATTTAGCGAAGGAGTTAGCGGAGCTTTTCGTCACGGACCTGGCGACACCGAAAAATATCTCTCTTCTAAGGTTAATGTGGATACTAATTTTGGGTCTGTAATTTTTGACGCCTCAACGGTAGTTCCTACCGCAAATGAAAACAGACCGTACACGGCTAACCTTTCCGTGAGAATTCACAGAGGCCGAGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c9ad22ab4e19b79e3fc4767f0d86fa180d46dff5d5f855876f2d1b7ef8b944a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8420
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank