Protein

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Genbank accession
QGT53573.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MQSASEVTTADYPSYIGQYTDFAQADSTNPSAYTWSLIRGNDGERGPQGLKGDPGATGIPGQPGADGKTSYLHIAYATNSTGTAGFDVSNATGKTYIGQYTDFTSADSTDPSKYTWSLIKGDKGDKGERGIQGPAGSNGDPGKIVSDTEPTTRFKGLTWKYYNINGDNLSVTNGTFTDGKIKSTWNSGTASGSTEIENSHINMSATNSSSKVTNSLGLDIQQGFGMRWTDPASNQSRSVSLDYGNLAFDRNGVAAGLNFDGANLSSSMPIQAPNTIVKSTQFSVSGIGIRLDRMMSFVAVTFSGQASSTINNSPTIINVLPDGFRPISPYSIDYMVPGNTANNGYIYFNPDGSIRIMATINSGYYIRGTRFYITNDVYPS
Physico‐chemical
properties
protein length:380 AA
molecular weight: 40437,76350 Da
isoelectric point:5,10092
aromaticity:0,10263
hydropathy:-0,48684

Domains

Domains [InterPro]
DC_1971
STR
3–56
DC_1971
G3DSA:1.20.5.320
STR
40–101
G3DSA:1.20.5.320
DC_1971
STR
49–312
DC_1971
QGT53573.1
1 380
Architecture
STR
STR 3-312 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHPC974
[NCBI] 		2675262 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT53573.1 [NCBI]
Genbank nucleotide accession
MN689530.1 [NCBI]
CDS location
range 16953 -> 18095
strand +
CDS
ATGCAATCAGCTAGCGAAGTCACAACTGCTGATTATCCAAGCTACATCGGTCAGTACACAGACTTTGCGCAAGCTGACAGCACTAATCCATCCGCCTATACTTGGAGTCTGATACGGGGGAATGACGGGGAAAGAGGTCCACAAGGATTAAAAGGTGACCCTGGAGCAACTGGTATCCCCGGACAACCCGGAGCTGACGGAAAAACAAGCTATCTTCACATCGCCTATGCCACAAACTCAACTGGTACGGCTGGATTTGATGTATCAAATGCGACTGGTAAAACTTATATTGGACAATATACAGACTTTACGAGTGCTGATTCTACAGACCCAAGTAAGTACACATGGAGCTTGATTAAAGGTGATAAAGGCGATAAGGGAGAGCGAGGCATCCAAGGTCCTGCTGGAAGTAACGGTGACCCTGGTAAAATCGTTTCCGATACTGAGCCAACTACACGCTTCAAAGGCTTGACTTGGAAGTATTATAATATCAATGGTGATAATCTAAGTGTTACAAACGGAACTTTTACCGACGGGAAAATAAAAAGTACATGGAACTCAGGTACAGCATCGGGTAGCACGGAAATTGAAAATAGTCACATCAACATGAGTGCAACAAATTCATCAAGTAAAGTGACAAATAGTTTAGGACTGGATATCCAACAAGGTTTTGGGATGCGTTGGACTGATCCAGCTTCTAATCAATCAAGATCAGTTTCACTTGATTATGGAAACTTGGCTTTTGATAGAAATGGAGTAGCAGCAGGACTAAACTTTGATGGGGCCAATTTATCAAGCTCTATGCCTATTCAAGCCCCGAACACAATTGTTAAGTCAACTCAGTTTAGCGTTAGTGGGATAGGAATCCGTTTAGACCGAATGATGTCATTTGTTGCAGTTACTTTTTCAGGGCAAGCTTCTTCAACGATTAACAACTCTCCAACAATTATCAATGTTCTTCCAGATGGATTTAGACCAATTAGTCCATACTCAATAGACTATATGGTACCTGGTAATACAGCTAATAATGGTTATATCTATTTTAATCCAGATGGTTCAATTAGGATTATGGCAACTATTAATAGTGGTTATTACATTAGGGGAACAAGATTTTATATCACTAATGATGTTTATCCATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b35ebed24aa7ab85b90def344e78f02eb50ff1c56856a2563b80f790e47a6ef9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank