Protein

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Genbank accession
YP_009044291.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MSTITQFPSGNTQYRIEFDYLARTFVVVTLVNSSNPAMNRVLEVGRDYRFLNPTMIEMLIDQSGFDIVRIHRQTGTDLVVDFRNGSVLTASDLTNAELQAIHIAEEGRDQTVDLAKEYADAASSSAGSAKDSEDEARRIAENIKASGLIGHITRRSFEKGFNVTTWNEVLLWEEDGDYYRWDGTLPKNVPAGSTPETSGGIGLGAWVSVGDASLRSALKTNNGSNLVGTNNGLTVQQRLNLDRADISNYGYVYGSGADGKDAVLSAVSDHGYAHVTGATTLSSFDWPEGARLTGKATITYTRLPNVPCELDSEIPVDHSLMKAVYVHRVFDICDMLQLKTAGFNTLIHYGQAWTNGGNMEKACNAAEAVGLKLILGGPVYGQTNTPATDLDSRDCVIGYYLFDEPQNNSVSRAVQETRISAFKSFTEKSLCIAENGIFGFDSNTHPNGYGGTGYDIIFADAYYHDDWDDARNKRQAVIGWGELKYKCPTSRIVPCVGLFTTDANGGSDNFKNKAKQIAFAKKFFNMGDGEYAAFSWETQLIVNTHNTLTTDTDLYALGKELNSAPRQKPYDIDVYAFYPDRMGGAMQLYNDKYSSADVTPFQTINTGSVQGERNTTFKQGGIAARNTGGVFATRMKNHGYIAFELYYFNGADSANTSAAITTCTDDFYTNTEQLTFTYNNSNNAWIKSVETAPNLGVGIKLVPSASYNMRWKMVRGGIIDCSWRGEEI
Physico‐chemical
properties
protein length:728 AA
molecular weight: 79944,86940 Da
isoelectric point:5,10036
aromaticity:0,10577
hydropathy:-0,36964

Domains

Domains [InterPro]
DC_0369
STR
1–721
DC_0369
IPR005604
ATT
10–114
IPR005604 G3DSA:2.10.10.80
IPR040775
RBD
155–211
IPR040775
YP_009044291.1
1 728
Architecture
ATT
STR
ATT
STR
ATT 1-114 | STR 115-150 | ATT 151-221 | STR 222-721 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009044291.1
1 728
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,9935
Central domain 258 499 243 0,8017
C-terminal 500 728 228 0,7629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-499
C-terminal
500-728

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PE3-1
[NCBI] 		1498170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia
Host Escherichia coli O153
[NCBI] 		2170723 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009044291.1 [NCBI]
Genbank nucleotide accession
NC_024379 [NCBI]
CDS location
range 33473 -> 35659
strand +
CDS
ATGTCCACTATTACACAATTCCCTTCAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTCGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTGCCATGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGATTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGGAATGGCTCAGTGTTGACAGCTAGTGACCTGACCAATGCAGAGCTTCAGGCTATCCATATTGCAGAAGAAGGTCGAGACCAAACGGTTGACTTAGCTAAGGAATATGCCGATGCTGCTAGTAGCTCTGCTGGCAGCGCTAAGGATAGCGAGGACGAAGCACGACGAATCGCTGAGAATATCAAGGCATCTGGTCTAATTGGCCATATTACCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTACAACATGGAACGAGGTCCTGCTATGGGAAGAGGATGGTGATTATTACCGCTGGGATGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAAACTTCCGGTGGTATTGGGCTGGGCGCGTGGGTTAGTGTTGGGGACGCGTCATTAAGAAGCGCACTTAAAACAAATAATGGTTCCAATTTAGTTGGGACTAATAACGGATTAACTGTTCAACAACGATTAAATTTAGACCGCGCAGACATCTCTAATTACGGGTATGTTTATGGTAGTGGTGCTGATGGTAAAGACGCGGTGCTATCAGCCGTATCGGACCACGGGTACGCACACGTAACTGGCGCCACGACATTATCGAGTTTTGATTGGCCTGAAGGAGCCAGATTGACAGGAAAGGCCACCATCACATACACAAGGCTACCAAACGTTCCATGTGAACTTGATAGTGAAATACCTGTAGACCATTCACTGATGAAGGCTGTATACGTTCATCGCGTGTTTGATATTTGTGACATGTTACAACTAAAAACCGCCGGGTTTAATACGCTAATTCACTACGGTCAAGCGTGGACAAACGGTGGGAATATGGAAAAGGCCTGTAACGCCGCAGAAGCTGTTGGGCTTAAACTTATACTTGGTGGGCCAGTATACGGGCAGACAAACACTCCGGCTACAGACCTTGACAGCAGAGATTGCGTTATCGGCTATTACTTGTTTGATGAACCGCAAAATAATTCAGTAAGCAGAGCAGTGCAAGAAACGCGCATCTCGGCATTTAAATCATTCACAGAAAAATCATTATGCATAGCTGAAAATGGTATTTTTGGGTTTGACTCAAATACACACCCGAACGGTTATGGTGGTACTGGATATGATATTATATTTGCAGACGCGTATTACCATGATGACTGGGATGATGCCCGGAATAAGCGACAGGCTGTTATTGGGTGGGGGGAACTGAAGTATAAATGTCCCACATCAAGAATTGTACCTTGTGTTGGATTGTTTACAACTGACGCAAATGGTGGTTCTGACAACTTCAAAAACAAAGCAAAACAGATAGCTTTCGCTAAGAAGTTTTTTAACATGGGTGACGGTGAGTATGCGGCGTTCTCGTGGGAGACACAACTCATCGTAAACACACACAACACATTGACCACCGATACTGATTTGTATGCTTTAGGGAAAGAATTAAATTCTGCACCTAGACAAAAACCTTATGACATAGATGTGTATGCATTTTACCCGGATAGAATGGGTGGAGCTATGCAGTTGTACAATGACAAGTACAGTTCTGCCGATGTCACACCATTCCAGACTATCAATACCGGGAGCGTACAAGGTGAGCGTAACACTACATTTAAACAGGGTGGTATTGCGGCAAGAAACACTGGCGGTGTGTTTGCTACGAGGATGAAGAACCACGGCTACATAGCCTTTGAGCTGTATTATTTTAATGGGGCAGATTCTGCGAATACTTCAGCAGCAATAACAACATGTACTGATGACTTCTACACTAATACAGAGCAATTAACATTCACGTACAATAATTCAAATAACGCGTGGATTAAGTCTGTTGAAACAGCTCCCAATTTGGGTGTTGGTATAAAGCTTGTTCCTTCGGCGTCGTACAACATGCGGTGGAAGATGGTGCGCGGAGGGATTATCGATTGCTCGTGGAGGGGAGAGGAGATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
08cb065468c9c93267a9508bcce30ee48fc8db15395e05527f555c2ad3d564db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6965
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E.coli O153 phage PE3-1 complete genome Xin,Y., Chun,L.X., Juan,L. and Jing,H. 2016-08-19 — GenBank