Protein

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Genbank accession
ADH03039.1 [GenBank]
Protein name
gp17
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MVELDKYLPVNREEAFRNGVNKNFAKIEQGFSQRDAVMNSHQTTQKNAHDTEQILHYLSDKEKDVYYHSALDLKHYLLLECSRISNLVLGATTDQSVELKESRVDLEGKAHITLYGRLLADFTRLKNALDKLIELEESFDIPKIEPQFWTELGGIRNVVQQYFWINKLNGRVYQTQSDSQAQEGFYINELTPSGHFLGTMHIPKGGHGTSLGVEYVNGQMFMWTNVDKRLVKFTFKADTKLDATLLRDYMPSSVAPVFFAPVSDWKGEKMAFRRSDGIIELRDVNDLNKNIDKVYAQVTIPLEERENDYRPMQGVAISDKNCYWMSGWGTDENIGKVFVYDWHGKLLDTITLDNLTQVTGVGGEEYASDNHSEPEGLFFTEDKGKKVLFVGFSTGGTRKRHHKIYGFSQRGGLERYSSIVRNGAQNYPLTRGDGKAHSTPDGLTKLSDLTKVGSYYAQGSDVALLTDLPVEFKGVPLWIDNLPAEQHNDVRQVITRRSTEKSMLKFERMINIGKAEQAFSVGSWTVYQSQTTRGEFIDASIYQNKLSNITSPMKMYMTAEQANLFTDHPVKNGNAGWFYENSGYGVTGEFRQTITINSSLRYEVYSRMVFADRVSEWFVIAGNQVK
Physico‐chemical
properties
protein length:626 AA
molecular weight: 71254,33100 Da
isoelectric point:6,10197
aromaticity:0,11022
hydropathy:-0,51326

Domains

Domains [InterPro]
DC_0125
ATT
1–187
DC_0125 DC_1773
IPR048799
RBD
159–406
IPR048799 DC_1285
IPR048799
RBD
159–395
IPR048799
SSF101898
RBD
161–396
SSF101898
ADH03039.1
1 626
Architecture
ATT
RBD
STR
ATT
ATT 1-187 | RBD 188-394 | STR 395-537 | ATT 538-626
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADH03039.1
1 626
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,7488
Central domain 206 405 201 0,7024
C-terminal 406 626 220 0,3467
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-405
C-terminal
406-626

Taxonomy

  Name Taxonomy ID Lineage
Phage Brochothrix phage NF5
[NCBI] 		764561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brochothrix thermosphacta
[NCBI] 		2756 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADH03039.1 [NCBI]
Genbank nucleotide accession
HM144385 [NCBI]
CDS location
range 14204 -> 16084
strand +
CDS
ATGGTTGAATTAGATAAATATTTACCAGTCAATCGTGAGGAAGCGTTTCGTAATGGTGTAAATAAAAATTTTGCGAAAATAGAACAAGGATTTAGTCAACGCGATGCAGTGATGAATAGTCACCAAACAACACAAAAAAATGCACACGACACAGAGCAGATATTGCATTATTTAAGTGATAAAGAAAAAGATGTCTACTATCATTCAGCGTTAGACCTTAAACATTACTTGTTGTTGGAATGCTCACGTATCAGTAATCTTGTTTTAGGCGCTACTACAGACCAGTCTGTAGAATTAAAAGAGTCGCGTGTTGATTTAGAAGGAAAAGCACACATAACTTTGTATGGTCGATTACTTGCTGACTTTACAAGACTTAAGAATGCATTAGACAAATTAATCGAACTTGAAGAAAGTTTCGATATTCCAAAAATAGAACCGCAATTCTGGACGGAATTAGGCGGCATTAGAAATGTTGTACAGCAATATTTTTGGATAAATAAATTAAACGGTCGTGTTTATCAAACACAATCAGATAGTCAAGCACAGGAAGGGTTTTATATCAACGAATTAACTCCGTCTGGACATTTTTTAGGAACAATGCACATCCCTAAAGGTGGACATGGTACGTCATTAGGCGTTGAATATGTAAATGGACAAATGTTTATGTGGACTAATGTTGATAAAAGACTTGTTAAATTTACCTTTAAAGCTGATACGAAGTTAGATGCAACGCTATTAAGAGACTATATGCCTTCGTCTGTTGCGCCTGTGTTCTTTGCGCCTGTATCAGATTGGAAAGGTGAGAAGATGGCTTTCCGACGTTCAGACGGCATCATTGAATTGAGAGATGTAAACGATCTTAATAAGAATATCGATAAAGTATATGCACAAGTGACAATACCGCTAGAAGAACGTGAGAATGATTATAGACCAATGCAAGGCGTTGCGATAAGCGACAAAAACTGCTATTGGATGAGCGGATGGGGAACTGATGAAAACATCGGAAAAGTTTTTGTTTATGATTGGCATGGCAAACTTTTAGATACTATTACCCTTGATAATTTGACACAGGTTACTGGTGTGGGCGGCGAAGAATACGCATCAGATAACCATAGCGAACCCGAAGGACTTTTTTTCACTGAGGATAAAGGTAAAAAAGTTTTGTTCGTCGGTTTTTCTACCGGAGGAACTCGTAAACGACATCATAAAATTTACGGATTTTCTCAGCGTGGCGGACTTGAAAGGTATTCTAGTATCGTAAGAAACGGCGCTCAAAATTACCCTTTAACAAGAGGTGATGGAAAGGCCCATAGTACGCCTGACGGATTAACTAAATTGTCAGATTTAACAAAAGTTGGCTCTTATTATGCGCAAGGTTCTGATGTAGCGTTATTAACGGATTTGCCTGTTGAATTTAAAGGCGTGCCGTTATGGATAGACAATCTTCCTGCTGAACAGCACAACGATGTTAGACAAGTGATAACTAGACGTTCCACAGAAAAGTCAATGTTGAAGTTCGAACGAATGATTAACATCGGCAAGGCGGAACAAGCTTTTTCTGTAGGCTCTTGGACTGTTTACCAATCTCAAACAACAAGAGGTGAATTTATAGATGCATCTATTTACCAAAATAAATTAAGCAATATAACATCCCCGATGAAAATGTATATGACAGCAGAGCAAGCTAATTTGTTTACAGATCATCCTGTAAAAAATGGAAACGCAGGTTGGTTCTACGAAAATTCAGGTTATGGCGTTACAGGCGAATTTAGACAAACGATTACTATTAACTCATCTTTGAGATACGAAGTCTATTCTAGAATGGTGTTTGCAGACCGTGTGAGTGAATGGTTTGTTATTGCAGGTAATCAAGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ac4e898eb64cf6210d01618677b0e7e5752f35a514273849612dbb3c1c34001
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7353
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Brochothrix thermosphacta bacteriophages feature heterogeneous and highly mosaic genomes and utilize unique prophage insertion sites Kilcher,S., Loessner,M.J. and Klumpp,J. 2010 20709901 GenBank
Genome analysis of three heterogeneous Brochothrix thermosphacta bacteriophages Kilcher,S., Loessner,M.J. and Klumpp,J. 2010-10-15 — GenBank