Protein
View in Explore- Genbank accession
- QIG62753.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSPTFTF
- Protein sequence
-
MSISFNHPKNTVTSTGSLNLIVTTGNPTSPQPIRFNATSVIMPVRALPSGEAGAMVFDTGTKTMKYHNGLSWVEMLGQDTILQPIYTEINNINQKLGTKVDSVTYNSGAVPQASISGTQLSITFPISSGGSTGSNGLFTSSKQGSIQMYALSDGMSAATIREQMSGKSGGQNGRNGSQSSPFISNDGWCFADGMWWTWEGESGTVTQRVPNLNQQAYLKPMSVSGTIQIGSVIASSAAIGGTSLTIAQLPPHSFNVSGQTDAAGDHVHTFPLSNQRSGTGWADGATPNRYDGDGRTNNGGIHIHTFQGTTNTLGSGQPHSHSISNLDVNHFNVAVIYNIATPSFALNESAANGKYVLKTGDTMTGSLTIATAATIKGNDSNLTMTWRNSSNAERAMIYHSSTNNTLRFRSNGGTEMTLNQSGVLTTSNVSATSLTVSGNSATVNGRNIVRSVNGIVADGNGNVNLPTGDAVTDVMVGDRRTAGVSESPIYPGYIMTGWAFGNKKELRGASYYTAPLMIFVNGSWRNVAYK
- Physico‐chemical
properties -
protein length: 530 AA molecular weight: 55806,25590 Da isoelectric point: 8,79363 aromaticity: 0,07170 hydropathy: -0,28736
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
530
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 254 | 254 | 0,4952 |
| Central domain | 255 | 453 | 200 | 0,0484 |
| C-terminal | 454 | 530 | 76 | 0,9889 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-254
1-254
Central
255-453
255-453
C-terminal
454-530
454-530
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Salmonella phage SE_PL [NCBI] |
2712932 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Salmonella enterica subsp. enterica serovar Typhi [NCBI] |
90370 | Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QIG62753.1
[NCBI]
Genbank nucleotide accession
MT001829.1
[NCBI]
CDS location
range 90570 -> 92162
strand -
strand -
CDS
ATGAGTATTAGTTTTAATCATCCTAAGAATACGGTGACTAGTACTGGATCATTGAATTTAATTGTAACTACAGGTAACCCTACTTCACCACAACCAATTAGATTTAATGCCACATCAGTAATTATGCCAGTACGTGCATTGCCATCAGGTGAAGCAGGTGCTATGGTGTTTGATACTGGTACTAAAACCATGAAATATCATAATGGCTTGAGTTGGGTAGAAATGCTCGGTCAAGATACGATTTTACAACCGATTTATACAGAAATCAACAATATTAATCAAAAGCTAGGTACTAAAGTAGATAGTGTAACCTATAACTCAGGAGCAGTTCCACAAGCATCTATTAGTGGTACACAATTAAGTATCACATTCCCTATTTCTAGTGGTGGTAGTACTGGTAGTAATGGTTTGTTCACTTCATCTAAACAAGGCAGTATTCAAATGTACGCATTGTCTGATGGTATGTCTGCTGCTACTATACGTGAACAGATGAGTGGTAAGAGTGGTGGACAAAATGGAAGAAACGGTTCACAAAGTTCACCATTCATTTCTAATGATGGTTGGTGTTTTGCTGATGGAATGTGGTGGACATGGGAAGGTGAAAGTGGTACAGTAACTCAACGAGTACCAAATTTGAATCAACAAGCATACCTTAAACCAATGTCAGTTAGTGGTACGATACAAATTGGTTCTGTTATTGCATCATCTGCTGCAATCGGAGGTACTTCGTTAACAATCGCACAGTTACCACCTCACAGCTTTAATGTTAGTGGACAAACTGATGCTGCTGGCGATCACGTCCATACCTTCCCATTATCAAACCAAAGATCAGGTACTGGTTGGGCTGATGGTGCGACACCAAACAGATATGATGGCGATGGTAGAACTAATAATGGTGGGATTCACATACACACATTCCAAGGAACTACTAATACTTTAGGTTCTGGTCAGCCTCATAGTCATTCCATTAGTAACTTGGATGTAAACCACTTTAATGTAGCAGTAATTTATAATATTGCGACTCCTAGTTTTGCATTGAATGAATCTGCTGCTAATGGAAAATATGTATTAAAAACAGGTGATACCATGACAGGTTCACTAACTATTGCAACTGCTGCGACCATAAAAGGTAACGATTCGAATCTTACAATGACATGGCGTAATAGTTCTAATGCTGAACGTGCAATGATTTATCATAGTTCGACAAACAACACACTCCGTTTCCGTTCCAATGGTGGTACTGAAATGACGTTAAACCAATCTGGTGTTTTAACAACATCTAATGTATCAGCAACTTCACTAACTGTATCTGGTAATAGTGCTACCGTTAATGGTAGAAACATTGTTCGTTCCGTAAATGGTATTGTTGCTGATGGTAATGGGAATGTTAATTTGCCAACTGGAGATGCGGTAACTGATGTAATGGTTGGTGACCGTCGAACTGCTGGTGTAAGTGAATCGCCCATTTATCCGGGATATATAATGACAGGATGGGCTTTTGGTAATAAGAAAGAATTACGTGGTGCATCATATTATACTGCCCCATTGATGATTTTCGTGAATGGGTCATGGCGAAATGTAGCATACAAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
b80e10d98c7723fd08a4334483286b1cd4105fae66f97a487aebba57d5af4dd1
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50