Protein

View in Explore
Genbank accession
QBX23363.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MTLEERIPIKVLFDRKDAAEWQRLNPVIDDGELVVELDTHRLKVGDGKLTYNDLPYYEGPQGESITKVQLSENGDLSVWIGEKETKLGNIKGQKGDKGTSITDITKDGETLTIKLSDDTQKTFNIPNGQKGDRGKGVESARVDEEGNLFVKFEEESEKLLGNIKGQKGDKGDPLKFEDLTPDQIAQIKAKDVDLSAYATKAELAEIDVSKQLTDYLSKTEAESTYAKASHKHSLSDISDLNLDRYATKIELQNKASTYHRHRTSDIDGIDEYLKQTDLPQDMVKQSDIRDVVRNAQLSGYVRLADIQYQLNNIGKLKDETTGQYLSVKVVDNGQVPYDTSGMIVFERAGGK
Physico‐chemical
properties
protein length:351 AA
molecular weight: 39192,21860 Da
isoelectric point:4,96093
aromaticity:0,05983
hydropathy:-0,76068

Domains

Domains [InterPro]
SSF69349
STR
9–319
SSF69349
DC_0679
STR
32–346
DC_0679
QBX23363.1
1 351
Architecture
STR
STR 9-346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan126
[NCBI] 		2547992 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23363.1 [NCBI]
Genbank nucleotide accession
MK448848.1 [NCBI]
CDS location
range 28157 -> 29212
strand +
CDS
ATGACGCTAGAAGAAAGAATACCAATTAAAGTCTTATTTGACCGCAAGGATGCCGCCGAATGGCAAAGATTAAATCCTGTCATTGACGACGGCGAGCTAGTCGTAGAGCTAGACACTCACAGGTTAAAGGTCGGAGATGGCAAATTGACTTACAACGACTTGCCTTACTACGAAGGTCCGCAAGGAGAATCTATCACTAAGGTACAGCTATCCGAAAACGGAGACTTATCGGTATGGATTGGGGAAAAAGAGACTAAACTCGGTAACATCAAAGGTCAAAAGGGTGACAAAGGTACAAGTATTACTGACATCACAAAAGATGGTGAGACGCTCACTATCAAACTATCAGACGACACTCAAAAAACCTTTAATATCCCCAATGGCCAAAAAGGAGATAGAGGAAAAGGAGTAGAGAGTGCTCGAGTTGATGAAGAGGGGAACCTTTTTGTCAAGTTTGAAGAAGAATCTGAAAAGCTACTTGGCAACATCAAAGGTCAAAAAGGTGATAAGGGTGATCCCTTGAAGTTTGAAGACCTTACCCCTGATCAAATTGCCCAAATCAAAGCTAAAGACGTTGACTTATCGGCTTATGCTACAAAGGCAGAGCTGGCAGAGATTGACGTGAGTAAGCAGCTTACAGACTATCTATCTAAGACAGAGGCAGAGAGCACTTATGCTAAAGCAAGTCACAAGCACTCGCTAAGTGATATTTCTGATCTAAATCTAGACCGGTATGCGACTAAAATAGAGCTACAAAACAAAGCAAGTACATATCACCGGCACAGAACATCTGATATTGATGGTATAGATGAATACCTTAAACAAACTGATCTGCCACAAGACATGGTTAAGCAATCAGATATTAGGGACGTTGTCCGAAATGCGCAGCTAAGCGGCTATGTTAGATTAGCTGATATCCAGTATCAGTTAAACAACATCGGAAAGCTAAAAGATGAGACAACCGGTCAGTATCTATCTGTAAAAGTCGTTGATAATGGTCAAGTGCCTTATGACACCAGCGGCATGATTGTTTTTGAGAGGGCTGGGGGCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b773fb9fdcdb100b1c4769517293fb3991d111e58e201ac021df248c5c74fbe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8151
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank