Protein

View in Explore
Genbank accession
YP_009302043.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MLQKLTDVATNINVSTAENGFIGANFYTEDDGSAYIRITIRDNNEVLDFNKTDMTPRLDLFSSDGSIFTNEPLEIILPEYGVIQYKVSDNVIKHAGKVDAKLFLANEKDSVHVANFYFTITDSGMTGPIGKEIHVDSLQDLVRNVMKENAIGLLDDDFKDKLENDLKVYMEENADTFKGEQGIQGVPGKDGKPFTYNDFTQEQLDQLKAKGTDTGWQTLPLVNGITQAGTLNKPMYKLISINDTEMLFIKGAVSSINSKEMIFAKLPKNISDKVKDYKQYTKAGVNSSQLIIYNVTITQSGDLEITFDPKSEAMPYGAYYIEGIVVL
Physico‐chemical
properties
protein length:327 AA
molecular weight: 36414,71520 Da
isoelectric point:4,65497
aromaticity:0,09174
hydropathy:-0,32294

Domains

Domains [InterPro]
DC_0885
STR
1–313
DC_0885
G3DSA:2.60.40.3350
ATT
8–126
G3DSA:2.60.40.3350
IPR018913
ATT
11–146
IPR018913
YP_009302043.1
1 327
Architecture
ATT
STR
ATT 1-146 | STR 147-313 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage CNPx
[NCBI] 		1792269 Uroviricota > Caudoviricetes > Rockefellervirus >
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009302043.1 [NCBI]
Genbank nucleotide accession
NC_031241.1 [NCBI]
CDS location
range 22518 -> 23501
strand +
CDS
ATGTTACAAAAACTTACAGATGTTGCTACTAATATAAATGTTAGTACAGCTGAGAACGGTTTTATTGGCGCTAATTTTTATACAGAAGATGACGGATCAGCTTATATAAGAATCACTATCAGAGATAACAACGAAGTGTTAGATTTTAACAAAACTGATATGACTCCTCGTTTAGATTTGTTTAGTTCAGACGGTTCTATATTCACTAATGAACCGTTAGAGATCATTTTACCTGAATACGGCGTCATTCAATATAAGGTGTCTGACAATGTCATTAAACACGCAGGGAAAGTAGACGCGAAATTATTCTTAGCTAATGAAAAGGATAGTGTTCACGTCGCTAACTTTTATTTCACTATCACAGATAGTGGAATGACTGGACCGATTGGAAAAGAAATACATGTAGATTCATTACAAGATTTAGTTAGAAACGTTATGAAAGAGAATGCTATAGGATTATTAGATGATGATTTCAAAGATAAGTTAGAGAACGATTTGAAAGTATATATGGAAGAAAATGCTGATACATTCAAAGGAGAACAGGGTATACAAGGTGTTCCTGGAAAAGACGGTAAACCATTCACGTATAACGATTTCACACAAGAACAATTAGACCAGTTAAAGGCTAAAGGTACTGACACAGGCTGGCAAACACTTCCTCTTGTGAACGGAATTACACAAGCTGGGACACTTAACAAGCCAATGTATAAATTAATCTCTATTAATGATACAGAAATGCTATTTATAAAAGGTGCAGTAAGTTCCATTAACAGTAAAGAAATGATTTTTGCGAAACTCCCGAAAAACATCTCGGATAAGGTGAAAGATTATAAACAATATACAAAAGCGGGCGTTAATTCATCTCAATTAATCATCTACAACGTGACTATAACTCAAAGTGGAGATTTAGAAATAACATTTGACCCTAAAAGTGAAGCAATGCCTTATGGCGCTTATTACATCGAAGGAATAGTCGTTTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3920e99cd45a76e2e1b8bcd75b133108f4e157b30bdc22c41481fb9952c080db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A eukaryotic-like serine/threonine kinase protects bacteria against viruses Depardieu,F., Didier,J.-P., Bernheim,A., Sherlock,A., Molina,H., Duclos,B. and Bikard,D. 2016-10 — GenBank