Protein

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Genbank accession
AGN12092.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISRISGNQIATSTSAIITTLSFLNTNSIFRLPSGTQAQRPTGVSVGTMRFNSTTDSAEIYKADDGTGSAGWAPLAGGGPSLGTDSIIRTNPTTIAENITVGPTAGAEFANGMSAGPITIATGYTVTVENGGAWSVR
Physico‐chemical
properties
protein length:138 AA
molecular weight: 13943,30560 Da
isoelectric point:5,13526
aromaticity:0,05797
hydropathy:0,01087

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM3
[NCBI] 		536453 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus pssm3
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12092.1 [NCBI]
Genbank nucleotide accession
HQ337021.1 [NCBI]
CDS location
range 107320 -> 107736
strand +
CDS
ATGGCAATTTCAAGAATCAGTGGTAATCAGATTGCCACTTCAACAAGTGCAATTATAACGACATTGAGTTTCTTAAATACAAACTCAATATTCAGACTACCTTCAGGTACTCAAGCACAAAGACCTACTGGTGTATCAGTTGGTACCATGCGTTTCAACTCGACAACTGACTCTGCTGAAATCTACAAAGCAGATGATGGTACAGGAAGTGCAGGTTGGGCACCATTAGCAGGTGGAGGACCTTCATTAGGAACTGATAGTATAATTCGTACTAACCCAACGACAATAGCAGAAAACATAACAGTCGGACCTACAGCAGGTGCAGAGTTTGCCAACGGAATGAGTGCAGGTCCAATAACGATTGCAACAGGATATACGGTAACAGTTGAGAACGGTGGTGCATGGAGTGTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d50a5a4bb05a639e49bfdd64651d44d0252caff4fc71f7185b08928fe5c47d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6491
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank