Protein

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Genbank accession
AUR95510.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRYVPTSPRSVPEIRAELDKIAEAIDTMLDREGTGPNQMDAPLDMNGQPILNADLSSTAVMVLSQKEEFTLTSGQTTVNTTLSTDTAVFYINGASTDNGRMFEGIDYTVTGANQIELTVPYPVGSSLLMTFTDLENASNMINGGVY
Physico‐chemical
properties
protein length:146 AA
molecular weight: 15751,43700 Da
isoelectric point:4,05003
aromaticity:0,06164
hydropathy:-0,18082

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.208.B._10N.222.52.A7
[NCBI] 		1881437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95510.1 [NCBI]
Genbank nucleotide accession
MG592578.1 [NCBI]
CDS location
range 21721 -> 22161
strand +
CDS
ATGCGATATGTACCCACAAGTCCTCGGTCAGTTCCTGAAATTAGAGCAGAGCTTGACAAGATTGCAGAAGCTATAGATACCATGCTAGACCGAGAAGGAACTGGCCCTAACCAGATGGACGCCCCTCTGGATATGAATGGTCAACCTATCTTGAATGCGGATTTATCTTCGACAGCCGTTATGGTGTTATCTCAGAAAGAAGAGTTCACACTGACATCAGGACAGACTACTGTGAATACCACACTATCGACAGATACAGCGGTGTTTTATATTAATGGGGCATCAACAGATAATGGTCGTATGTTTGAAGGAATCGACTACACGGTAACAGGAGCTAATCAGATTGAGCTAACAGTGCCTTATCCTGTAGGTTCCTCTCTCTTGATGACTTTTACAGATTTAGAGAATGCATCTAATATGATTAATGGGGGTGTTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98004c1749c74691eeb6e80f768e40a64bee96243d27a76d188ff347413f0567
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank