Protein

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Genbank accession
QCW20000.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVKVIERTYNEIFTPESTSWLLGNVGEWQKLKLKVEVSVDLYCDQENRLKIDYINNSFVLNDGKKWSDYGFDIGQNIQLVYKFKLDTNGDGIYEGPFYQAPNFTIVNIASNVMEVLQPIVIWVLADTIPYNQDSVRIIDCKFIAFVEPEGCRIVYGQISNENSENLSLQSFIDGTTTMFVQPNVKSQSLNINSSMNAVGMQSGMSVRMVSVKRIGLKPGSQNVYQYEFELQYLISSFFENISNFTNNQMPDYLLGDGSLTDNFQILFYPKWNNPNTFIQNDMKKTARLGNTGWFDENYNELENNFVIESLQYFDDNGNPVDAIDYFAPTKVKGIVSGVQNINTNTECGFGFIWVPKFEEDYKNKETPFYQNTFVNTGTTTDGFKVGTFYPLTNVGGGLNSASIDTKNVKFTDIGGGKISFEMIFTPNPNFYLFFDARNDDDRKYVLWLSVADQTLVRNFSDRVSLLVDLNSMIKTVPPAGPYPYIQNAFLEHPFDENAIGVDEYDGFVQDDVLCRLPFQLDPITTEFKKMRFAIEIYNPSTGVKKILEKFDVDMTQFFDDANGVPQFNLNQTRGFKLENGNNKNWLKINREPSLDSGGRFGYLAFYAFKIRYEDWINFPGMPNDFFSSTELNNGFHNDWIHYFNTIGWQMNFYTEIDAVENNELKRYKNKFKFKFKDYDLNQLISTQHRYYRDSDNTLLNVGTDPISGRPLGVIISNEPTRLEIEYEIMDGGTWDIANVYATATIEIDKGAGIMQMRQLSSVWGSENDNPLIPLPGQTKLKIEVDATLKRLTTKCLIDPDLLDDAIRYRITGRVGCFANGGSFEFGKYEARYEDKYE
Physico‐chemical
properties
protein length:837 AA
molecular weight: 96037,77250 Da
isoelectric point:4,69879
aromaticity:0,13859
hydropathy:-0,40442

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FPSV-D2
[NCBI] 		2575340 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium psychrophilum
[NCBI] 		96345 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW20000.1 [NCBI]
Genbank nucleotide accession
MK764436.1 [NCBI]
CDS location
range 33863 -> 36376
strand +
CDS
ATGGTTAAAGTAATTGAAAGAACGTATAATGAAATTTTTACACCAGAATCAACAAGTTGGTTATTAGGTAATGTTGGAGAATGGCAAAAATTAAAATTAAAAGTTGAAGTAAGTGTTGATTTATATTGTGACCAAGAAAATAGATTAAAAATTGATTATATTAATAATTCATTTGTTTTGAATGACGGAAAAAAATGGTCAGATTATGGATTTGATATTGGTCAAAATATACAATTAGTTTATAAATTTAAACTTGACACTAATGGGGATGGTATTTATGAAGGTCCGTTTTATCAAGCTCCAAATTTTACTATTGTAAATATTGCAAGTAATGTTATGGAGGTTTTACAGCCAATTGTTATTTGGGTGCTTGCCGATACAATACCATATAATCAAGATAGTGTTAGAATTATTGATTGTAAGTTTATTGCATTTGTAGAACCTGAAGGATGTAGAATAGTTTACGGACAAATTTCAAACGAAAATTCTGAAAATTTATCGTTACAATCATTTATCGATGGTACAACTACAATGTTTGTTCAACCAAATGTAAAATCACAATCACTAAATATTAATTCATCAATGAATGCCGTAGGTATGCAATCCGGTATGAGTGTAAGAATGGTAAGTGTTAAGCGTATTGGATTAAAACCGGGATCACAAAATGTTTATCAATACGAATTTGAATTGCAATATTTAATTTCATCATTTTTTGAAAACATTTCAAATTTTACAAATAATCAAATGCCAGATTATTTACTTGGCGATGGCTCGTTGACTGATAATTTTCAAATATTATTTTATCCAAAATGGAACAATCCAAACACGTTTATTCAAAATGATATGAAAAAAACGGCCCGACTTGGAAACACCGGTTGGTTCGATGAAAATTATAATGAACTTGAAAATAATTTTGTTATTGAATCATTACAGTATTTTGATGACAATGGAAATCCGGTTGATGCGATTGATTATTTTGCACCAACAAAAGTGAAAGGGATTGTTTCCGGTGTTCAGAATATTAACACAAATACTGAATGTGGTTTTGGTTTCATTTGGGTTCCAAAATTTGAAGAAGATTATAAAAACAAAGAAACGCCGTTTTATCAAAATACATTTGTGAACACGGGAACAACAACGGACGGTTTCAAAGTCGGGACATTTTATCCATTGACAAATGTTGGCGGCGGTTTAAATAGTGCATCAATCGACACTAAAAATGTAAAATTCACGGATATTGGCGGCGGAAAAATTTCATTTGAAATGATTTTCACACCAAATCCGAATTTTTATTTATTTTTTGATGCACGAAATGATGATGACCGAAAATATGTATTGTGGTTATCGGTTGCGGATCAAACATTGGTTCGTAATTTTTCCGACCGTGTTTCATTATTAGTCGATTTGAATTCTATGATTAAAACGGTTCCGCCGGCGGGTCCATATCCATACATTCAAAACGCATTTTTAGAACATCCATTTGATGAAAATGCAATTGGTGTTGATGAATATGACGGATTTGTTCAAGATGATGTTTTGTGTCGTTTACCATTTCAATTGGACCCAATCACAACCGAATTTAAAAAAATGCGATTTGCGATTGAAATATACAATCCAAGTACCGGCGTGAAAAAAATATTGGAAAAATTTGATGTTGATATGACACAGTTTTTCGATGATGCAAACGGTGTGCCGCAATTCAATTTGAATCAAACAAGAGGTTTCAAATTAGAAAATGGAAACAACAAAAATTGGTTGAAAATAAATCGTGAACCATCACTTGATTCCGGCGGCCGTTTTGGATATTTAGCATTTTACGCATTTAAAATTCGTTATGAAGATTGGATTAACTTTCCGGGAATGCCAAATGATTTTTTCAGTTCAACGGAATTAAATAATGGATTTCACAATGATTGGATTCATTATTTTAACACCATCGGATGGCAAATGAATTTTTACACTGAAATTGATGCGGTTGAAAATAATGAATTGAAACGTTATAAAAATAAATTCAAATTCAAATTCAAAGATTATGATTTGAATCAATTGATTTCAACACAACATCGTTATTATCGTGATTCAGATAATACGTTGTTAAATGTTGGAACGGACCCAATAAGCGGGCGACCACTTGGCGTGATTATTTCAAACGAACCAACACGACTTGAAATTGAATATGAAATTATGGACGGCGGCACGTGGGACATCGCCAATGTTTATGCAACTGCAACAATTGAAATTGACAAAGGCGCTGGAATAATGCAAATGCGACAATTATCATCGGTTTGGGGTTCAGAAAATGACAATCCGTTGATTCCGTTACCAGGTCAAACAAAATTGAAAATTGAAGTTGATGCAACGTTGAAAAGATTAACGACAAAATGTTTGATTGATCCGGATTTATTGGATGATGCAATTCGTTATCGAATCACTGGCCGTGTCGGTTGTTTTGCAAATGGTGGTTCATTTGAGTTCGGAAAATATGAAGCACGTTATGAAGACAAATATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff60e3057b36d7917590f543cb648dd4bcc6d192fbd03ab2b99a3c47cbb57195
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3960
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Host range and genomic characterization of Flavobacterium psychrophilum phages Castillo,D. Sr., Jorgensen,J., Sundell,K. and Middelboe,M. 2014-02-21 — GenBank