Protein

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Genbank accession
XHH73743.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MELEKLKATNQSLLNTPRLQGVNMKFVGIYVYGRQSFFKNESDEFRELFEFNSITLKANKSYIVQFSMPYELNTNGIYSESMGEIVLCLKANDKVFPILNSFYQNKTAHLSSDNKIVDAYMASVLFRMPEQKADYKIAVFARKHKDLWVKNSN
Physico‐chemical
properties
protein length:153 AA
molecular weight: 17776,22910 Da
isoelectric point:9,07820
aromaticity:0,13072
hydropathy:-0,35882

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11468_1
[NCBI] 		3331676 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73743.1 [NCBI]
Genbank nucleotide accession
PQ159901.1 [NCBI]
CDS location
range 10959 -> 11420
strand -
CDS
TTGGAATTAGAAAAGTTGAAGGCTACCAATCAAAGCTTATTGAATACGCCAAGACTACAAGGCGTTAATATGAAGTTTGTAGGGATTTATGTTTATGGTAGGCAAAGCTTTTTCAAAAATGAAAGCGATGAATTTAGGGAATTGTTTGAGTTTAATAGTATCACGCTAAAAGCGAATAAAAGCTACATCGTGCAATTTAGCATGCCTTATGAATTAAACACGAACGGTATCTATAGCGAAAGCATGGGTGAAATAGTGTTATGCTTGAAAGCGAATGATAAGGTTTTCCCGATCTTGAATAGCTTTTACCAAAACAAAACCGCTCATTTGAGCAGTGATAACAAAATCGTAGACGCTTATATGGCGAGTGTTCTGTTTAGAATGCCAGAGCAAAAAGCTGACTATAAAATAGCGGTATTCGCGCGAAAGCATAAAGATTTATGGGTAAAAAACAGCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af13f8b2952bb468d03834adc84558733066416175c1802db0768e501a5580b3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8201
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank