Protein
View in Explore- UniProt accession
- A0A2H4J982 [UniProt]
- Protein name
- Siphovirus-type tail component RIFT-related domain-containing protein
- RBP type
-
TSP
- Protein sequence
-
MITLDDKYRLEDFGFICEPGYDDPLTPSFTRKTYSIPGIEGVIPFGTEIKEKEFSYPLKIFERFHFDMQRKFEKFMDFFFDQYGNPRQVKMVRDYDPSKFYYVELAQQITPDRLPEDGKFVLPLVAHNPRAYSVVSSKDKITWGSKIPFATPITFGHKPSQYNVISPQTLIINNIGTLVVRPVIEIFGRAKSLTIRINGALFTFGDLTNGIVVIDAERYTVMKNGQNYLYEMKGNIEVLKMNPGENKVEIGGTDLAVQLTFDFRGKYK
- Physico‐chemical
properties -
protein length: 268 AA molecular weight: 30871,14400 Da isoelectric point: 7,71256 aromaticity: 0,13806 hydropathy: -0,29888
Domains
Domains [InterPro]
G3DSA:2.40.30.200
ATT
5–132
ATT
5–132
IPR008841
STR
9–125
STR
9–125
DC_1533
STR
62–267
STR
62–267
1
268
Architecture
ATT 5-132 | STR 133-267 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
268
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 189 | 189 | 0,8883 |
| Central domain | 190 | 257 | 69 | 0,0657 |
| C-terminal | 258 | 268 | 10 | 0,2980 |
Note: Constraints were applied during segmentation.
Fixed 20 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 20 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-189
1-189
Central
190-257
190-257
C-terminal
258-268
258-268
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
ASN71795.1
[NCBI]
Genbank nucleotide accession
MF417933
[NCBI]
CDS location
range 5758 -> 6564
strand +
strand +
CDS
ATGATTACATTAGATGATAAATATAGATTAGAAGACTTTGGGTTCATTTGTGAGCCAGGGTACGATGACCCATTAACACCTTCTTTTACTAGGAAAACATATAGTATTCCTGGAATAGAGGGTGTTATTCCGTTTGGGACTGAAATAAAGGAGAAAGAATTCTCGTATCCATTAAAGATTTTTGAAAGATTCCATTTTGATATGCAACGTAAATTTGAGAAGTTTATGGACTTTTTCTTTGATCAATACGGTAATCCAAGACAGGTTAAGATGGTACGTGATTATGACCCAAGTAAATTTTATTATGTAGAATTAGCACAACAAATTACTCCAGATAGGCTACCTGAAGATGGAAAGTTTGTATTACCTTTAGTTGCACATAATCCACGTGCTTATTCTGTTGTGAGTAGCAAAGATAAAATTACTTGGGGAAGTAAAATTCCTTTTGCAACACCAATTACATTCGGTCATAAACCTTCTCAATATAATGTAATTAGTCCACAAACATTGATTATTAATAATATAGGTACTTTAGTTGTTCGACCTGTCATTGAGATTTTTGGTAGGGCTAAATCATTAACAATTAGAATAAATGGCGCTCTATTTACTTTTGGGGATTTAACTAACGGAATTGTAGTAATCGATGCAGAAAGATACACGGTTATGAAGAACGGACAAAATTATTTATATGAAATGAAAGGTAATATTGAGGTGTTAAAAATGAATCCCGGTGAAAATAAAGTTGAAATCGGTGGTACTGATTTGGCGGTACAATTGACATTTGACTTCAGAGGAAAATATAAATAG
Genome Context
Genome Context
Tertiary structure
PDB ID
37a7057c700307121c2ce6df1a53444a4f0283f574ada214712a92f86dc17927
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50