Protein

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Genbank accession
UIW11015.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLQLENIQSGYNLSKINDNFQTIENAWDEKLDRLVSSQGNQMEQELDMNSNHIINHPAPRTETDLVRLKELEQFVIESDVEGVVPLISPRQVGDGVTTTFNTPHTKYAPPQSFIVNIDGVTQRPFTDYNVPSVGAIEFNEAPPLNADIDITYFEPNTIEAVVDVALDDGLKEAITESQEDIINGNIYKGSNGEYVQNGDTVPADTTHLRVLIGGKPTIVIMSTISSGTVSLLNEIGATVGVTSVKFLERGITNVKNFSDLTPAKEKISVFGRLYEFDDTQSLSDGIEFTNGAIYLTDSGNSYRMVNTDLAWIHLQKVLHQKGTDATQFIDALASAGMAVVINGWKLQLANYTLTTRIHGKGIITPGGNASDCVILDTGGILSGGVVVDGDNGSGGLYEVTRPVRMQKGSISPEVNKVTIQNFTAASFIGGLWVDNEGIEDFIINRLRCINIQAPDIGTEGSLEGTSRGVWYGTRSTNPTEGSASSGAIDGVYCKEIGPWKDADGLAIQAFDGLGGYVTAPVSINNVRTKNSEKRSVKVQANGVTVSNIVGRSDKLSEYLGNPRGMYAIVSMYGDISNRCSNVRGYGRVNSGVDTQGYCKVEDVAVNSTFTYESGAALAVTQGSCDGFNIQSIGLQHIISVRSNNGPVESVTVNGITGLSTERCVRIQATGGNNIDLVAIDGNSEIRTSSSTDYAIEIDQPINGNIGRISLSGRLNAQSNGDFYDIFLNGADKVQMTDLYFTGAATTGGAKVIGGEVFASDLDSDYSITLDLQNTTDAQVVNVKGNVRVQGTTDSRLAYCQSVVDQGGNTNLKQITWV
Physico‐chemical
properties
protein length:818 AA
molecular weight: 87724,55400 Da
isoelectric point:4,59233
aromaticity:0,06724
hydropathy:-0,20599

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UIW11015.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 342 342 0,9790
Central domain 343 769 428 0,9793
C-terminal 770 818 48 0,9198
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-342
Central
343-769
C-terminal
770-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio virus VPMCC5
[NCBI] 		2900301 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UIW11015.1 [NCBI]
Genbank nucleotide accession
OL676770.1 [NCBI]
CDS location
range 1279 -> 3735
strand -
CDS
ATGCCATTACAATTAGAAAACATTCAGTCAGGATATAACCTGTCGAAGATAAATGATAATTTTCAAACCATTGAAAATGCTTGGGATGAGAAACTAGATAGACTAGTGTCATCTCAAGGGAATCAAATGGAACAAGAGTTAGATATGAACTCCAATCATATCATTAACCATCCAGCTCCACGCACAGAGACTGACCTAGTGCGTTTAAAAGAATTGGAACAGTTTGTAATTGAATCAGATGTTGAAGGCGTGGTTCCTCTCATTAGCCCACGTCAAGTAGGTGATGGTGTAACAACTACATTCAATACTCCGCATACTAAGTATGCTCCTCCTCAAAGTTTTATTGTAAATATTGATGGTGTTACTCAGCGTCCATTTACAGACTATAACGTTCCTAGTGTAGGTGCAATTGAATTCAATGAAGCTCCTCCTTTAAATGCTGATATTGATATTACATATTTTGAGCCTAACACAATCGAAGCGGTAGTAGATGTTGCATTAGATGATGGGCTTAAAGAAGCTATTACTGAATCGCAAGAAGATATTATTAACGGTAATATTTACAAGGGTTCTAATGGAGAGTATGTTCAGAATGGTGACACAGTCCCAGCAGATACTACACACCTTCGCGTGTTGATTGGTGGTAAGCCTACTATTGTTATAATGTCAACTATTTCAAGTGGTACAGTTAGTTTATTAAATGAGATAGGCGCGACCGTTGGTGTAACTTCTGTTAAGTTTCTAGAAAGAGGGATTACAAATGTTAAGAATTTCTCTGATTTAACACCAGCAAAAGAAAAAATATCAGTTTTTGGTCGTCTATATGAATTCGACGACACACAATCTCTATCAGACGGGATTGAATTTACTAACGGTGCGATCTATTTAACGGATTCCGGAAATTCGTACCGTATGGTTAACACAGACTTGGCTTGGATACATCTACAAAAAGTGCTACACCAAAAAGGAACAGACGCAACCCAGTTTATTGATGCTCTGGCTTCCGCAGGAATGGCGGTTGTTATAAACGGATGGAAGCTACAACTTGCAAACTATACTCTAACAACAAGAATACATGGTAAAGGGATCATCACGCCGGGTGGTAATGCGTCTGACTGTGTTATTTTAGACACTGGTGGAATCTTATCTGGTGGCGTTGTTGTTGATGGTGACAACGGATCTGGTGGGTTGTATGAGGTAACAAGACCTGTTCGAATGCAAAAAGGCTCAATTTCACCGGAGGTTAATAAAGTAACAATTCAGAACTTTACTGCTGCATCTTTTATTGGTGGATTGTGGGTTGATAATGAGGGTATAGAAGACTTTATAATTAATCGATTGAGATGTATAAACATCCAAGCTCCTGATATTGGAACTGAGGGTAGTTTGGAAGGTACATCAAGGGGTGTATGGTATGGAACAAGGTCAACTAACCCAACAGAAGGGTCTGCGTCTAGTGGTGCTATAGACGGAGTTTACTGCAAGGAGATTGGCCCATGGAAAGATGCAGACGGATTGGCAATACAAGCATTTGATGGTTTAGGTGGTTATGTAACCGCACCTGTGTCTATAAATAATGTGCGCACAAAAAACTCAGAAAAACGGTCAGTTAAAGTTCAGGCAAATGGCGTAACTGTTAGCAATATTGTGGGTCGTTCAGATAAACTATCTGAATACTTAGGGAACCCTCGTGGTATGTATGCGATTGTAAGTATGTACGGTGATATTTCTAATCGATGCTCTAACGTAAGAGGGTATGGCCGCGTAAATAGTGGAGTGGATACTCAGGGGTATTGTAAGGTAGAAGATGTAGCGGTTAACTCTACGTTTACATACGAATCTGGCGCAGCTCTCGCAGTAACACAAGGATCATGCGATGGGTTCAATATTCAATCTATTGGACTTCAACACATTATATCCGTAAGGTCAAATAACGGACCCGTCGAAAGTGTGACGGTCAATGGAATTACGGGTCTTTCAACAGAGAGATGCGTGAGAATACAGGCTACAGGCGGGAATAACATTGACCTTGTAGCTATCGACGGTAACTCAGAAATAAGGACCTCAAGCTCTACGGACTACGCGATAGAGATAGACCAACCTATTAACGGTAATATAGGGCGCATCTCGTTATCTGGCCGTCTTAATGCTCAATCAAATGGTGATTTCTACGATATCTTTTTAAATGGCGCAGATAAAGTTCAAATGACCGACTTGTATTTCACAGGTGCGGCAACAACCGGGGGCGCTAAAGTTATAGGAGGGGAGGTTTTTGCTTCTGATTTAGATTCGGACTATTCAATAACTCTCGACTTACAAAACACTACAGACGCACAAGTGGTTAATGTTAAAGGGAATGTGCGAGTACAAGGAACCACGGATTCAAGGCTTGCATATTGTCAAAGCGTCGTAGACCAAGGCGGAAACACAAATCTTAAACAAATAACGTGGGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f360f8646dadc86e459b339351e30083992b910414293989416084dcde1036e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Vibrio phage VPMCC5 Kar,P. and Ghosh,K. 2022-11 — GenBank