Protein

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Genbank accession
XNX26568.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVTLDWKPQTDPDLRTELGSAQGADMIGLPQGGTVAQGVDVVTPAMFGAVGDGVADDSVAIQAAMDYCQINNRKLVIPSRRYRITKPLLYRNQGFYNYEIEGHGGAAVIIMDSLEKTGITAPDAFGDDFNVNAAMVVLNDTNQSKYCRISGLRFESPVGAEYAIYVGQTENSYIHDCFCTGFTFGWYDIGSWICRIERCVARSIVDTGFFKKTGTSTNISECYADQMERGYYLGGGYSSIVNCACDKTTRWGYYFKGGPAGTDLATFSMKGCGSEQSGADSVFYVDGLVSLSIEDHNAFNDPSLSAAPAALLSMASNTSYSQVVLKNIRTVNVDTLILDAADHNYFDLTNVTCRSAMSKEFYLGSNSRVLKRTYDGTRFITSNDQVGIGFTESDIVDGWTDLTLSGLRNGQFVIRRSISVSRTSGDAGAAVVTLLLI
Physico‐chemical
properties
protein length:437 AA
molecular weight: 47412,63790 Da
isoelectric point:4,81457
aromaticity:0,10297
hydropathy:-0,09085

Domains

Domains [InterPro]
IPR012334
STR
9–429
IPR012334
DC_1603
STR
24–258
DC_1603 DC_2316
IPR011050
STR
40–279
IPR011050
XNX26568.1
1 437
Architecture
STR
STR 9-437
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNX26568.1
1 437
Domain Start End Length (AA) Confidence
N-terminal 1 56 56 0,9681
Central domain 57 391 336 0,9741
C-terminal 392 437 45 0,8990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-56
Central
57-391
C-terminal
392-437

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_AMO_3701M
[NCBI] 		3388610 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNX26568.1 [NCBI]
Genbank nucleotide accession
PQ474795.1 [NCBI]
CDS location
range 24422 -> 25735
strand +
CDS
TTGGTAACGCTAGACTGGAAACCGCAGACAGACCCGGACTTACGTACGGAGTTAGGGTCTGCACAAGGTGCCGATATGATCGGACTCCCGCAAGGTGGTACTGTGGCGCAAGGGGTAGATGTGGTAACGCCCGCTATGTTTGGCGCTGTTGGCGACGGCGTTGCAGATGACTCAGTTGCAATACAGGCCGCAATGGATTATTGCCAGATTAACAATAGAAAGCTAGTCATTCCATCCCGGCGCTATCGAATCACCAAGCCATTGCTATATCGCAATCAAGGTTTTTATAACTATGAGATTGAAGGGCACGGAGGTGCTGCTGTAATCATCATGGATTCTCTGGAAAAAACTGGAATTACTGCGCCTGATGCCTTTGGCGATGATTTTAACGTTAACGCCGCGATGGTAGTTCTGAATGACACTAACCAGAGTAAGTATTGCCGCATTAGTGGATTGCGCTTCGAATCACCAGTTGGTGCTGAATACGCTATTTATGTTGGGCAAACCGAGAATAGCTATATCCATGACTGCTTTTGTACTGGGTTCACATTTGGATGGTACGACATTGGATCATGGATATGCCGGATAGAGCGATGTGTCGCGCGCAGTATTGTAGATACTGGTTTTTTCAAGAAGACTGGGACGAGTACTAATATCAGTGAATGCTATGCGGACCAGATGGAGCGAGGGTATTATTTAGGCGGTGGGTATTCGTCGATAGTAAATTGCGCATGTGATAAGACCACGCGCTGGGGTTATTACTTTAAAGGCGGCCCTGCAGGAACCGATTTAGCTACGTTCAGTATGAAAGGGTGCGGCTCAGAGCAATCAGGTGCAGATTCAGTATTCTACGTGGACGGCTTGGTTTCGCTAAGCATAGAAGACCATAACGCGTTCAACGATCCTTCTTTATCCGCCGCGCCAGCTGCATTACTTAGCATGGCTTCGAATACATCATATTCACAAGTTGTGCTGAAAAATATTAGAACAGTAAATGTAGATACATTAATTTTGGATGCTGCTGACCATAATTATTTTGATTTAACAAACGTCACATGTCGTAGCGCCATGTCTAAAGAGTTTTACTTAGGGAGTAATTCAAGAGTTTTAAAAAGGACGTATGATGGCACGCGATTTATTACTAGCAACGACCAAGTTGGTATTGGATTTACGGAATCTGATATCGTTGACGGATGGACAGATCTCACTTTATCTGGGTTGCGAAATGGGCAGTTTGTAATTAGAAGGTCTATATCCGTATCTAGGACTTCGGGAGACGCTGGTGCGGCAGTTGTAACACTCCTTTTAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f07e2bd212ff0014bbdc50328b375e92621ec9d32d0f13ee80eaf24c5b71d645
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50