Protein

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Genbank accession
XCO40686.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALSSLVKVGSWISTHKSRVASAVERLLRNKLDERVSVADFGAVADYSLAETSAYTDSTEAFRAAAVWSASTGNPVHIPPAERQGFGYYISGEIPMTPGASLDNPASPGLAARFVGAGKGKTFIFVDNRVSDFVLFSVYTTSGYPTSFGLVGASILPIERSSDELSKGTFLLNSGTNMAVVHDIFVDRGFRRGIDNVNGRSGTWTELTSLRDVWIRYCTEFDLGFRLHSIGPNGEVNVAPYSDSSFAGNFMDNVELEARNGGCCIFIDEKVHLYNSDWSAVMHTSDAVSYFIKNKGTRHRSTDRLSFEGEGSCVNQGGYDNMSGSWAIQSTSGVMKFTDTTNPFVVNASLIGPVTLKHSSFTTGAPAIKKVESLRPYRNTNPSRQIVGLTGDNIESAGYICYGDGPTKTNGFGILSATFNGKLEDIRLRYLLAASGLYTIDDAWNLDHMSPTNSTGPQLQITKSGYHHGKKGYRYTASASANASSQTVSVQLADLPDDAPFHFSVRVRGTGVEYTSIFVAQKGRNTNNGIGVFLGATIAVGPSSGWVAPGNLRVSDSGLMTFQLTTPVDVSISIIMDGIGNY
Physico‐chemical
properties
protein length:582 AA
molecular weight: 62552,17350 Da
isoelectric point:6,32228
aromaticity:0,09966
hydropathy:-0,15344

Domains

Domains [InterPro]
DC_2184
STR
1–578
DC_2184
IPR012334
STR
2–372
IPR012334
XCO40686.1
1 582
Architecture
STR
STR 1-578 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40686.1
1 582
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,9730
Central domain 47 372 327 0,9633
C-terminal 373 582 209 0,9313
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-372
C-terminal
373-582

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146044
[NCBI] 		3232223 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40686.1 [NCBI]
Genbank nucleotide accession
PP889493.1 [NCBI]
CDS location
range 3670 -> 5418
strand +
CDS
ATGGCATTAAGTTCTCTGGTTAAGGTAGGCAGCTGGATTAGTACGCACAAATCCAGGGTGGCGTCTGCAGTAGAACGATTATTAAGAAACAAATTAGATGAACGTGTATCTGTAGCTGACTTTGGGGCAGTGGCGGATTATTCCCTGGCGGAGACTTCTGCCTACACAGATAGCACGGAAGCGTTCCGGGCTGCCGCAGTATGGTCGGCCAGTACCGGCAACCCTGTGCACATTCCCCCAGCCGAGCGCCAAGGTTTCGGGTACTATATCTCTGGGGAGATCCCAATGACGCCCGGAGCCTCCTTAGATAACCCGGCTAGTCCTGGATTAGCTGCGCGCTTTGTAGGTGCAGGTAAGGGTAAGACCTTTATCTTTGTAGATAACCGCGTCTCAGACTTTGTTCTGTTTAGCGTGTACACTACCAGCGGGTATCCCACCTCGTTTGGGTTAGTCGGCGCGTCTATATTACCCATTGAGCGTAGCTCTGACGAGCTGTCCAAGGGCACGTTCCTGTTAAACTCAGGAACTAATATGGCTGTGGTACATGATATATTCGTTGACCGTGGATTTCGTAGGGGGATAGATAACGTCAACGGCAGGTCCGGTACTTGGACAGAACTCACATCTTTGCGCGATGTGTGGATTCGATACTGTACCGAGTTTGACCTTGGGTTCCGTCTGCACTCTATTGGGCCCAATGGGGAGGTGAACGTTGCCCCTTATTCTGATTCTAGTTTCGCTGGTAACTTCATGGATAACGTGGAGCTTGAAGCGCGGAACGGTGGATGCTGTATCTTCATCGATGAGAAAGTGCACCTGTACAACTCTGACTGGAGTGCAGTTATGCACACCTCAGATGCTGTTAGCTACTTCATCAAGAACAAAGGCACACGCCATCGTTCAACGGACCGCCTTAGCTTCGAAGGTGAAGGCTCTTGTGTCAACCAAGGTGGGTACGACAACATGAGTGGTAGTTGGGCCATCCAGAGTACATCTGGTGTGATGAAGTTCACAGACACAACCAACCCATTCGTGGTGAACGCCAGCCTCATTGGGCCAGTGACATTGAAGCACTCATCGTTCACAACTGGCGCCCCAGCCATCAAGAAGGTTGAATCGCTGCGACCATATCGCAACACCAACCCAAGTAGGCAGATTGTCGGTCTTACTGGTGACAACATTGAATCAGCAGGTTATATCTGCTACGGTGATGGCCCAACCAAGACCAATGGCTTTGGTATTCTGTCAGCCACTTTCAATGGTAAACTGGAAGATATTCGGCTTCGGTACTTGCTCGCTGCGTCCGGCTTGTACACCATCGACGATGCGTGGAACCTTGACCACATGTCACCTACGAACTCGACTGGTCCGCAGCTGCAGATAACCAAATCTGGATATCATCACGGCAAGAAGGGGTACAGATACACTGCCAGTGCAAGTGCAAACGCGTCTTCTCAGACTGTTTCAGTGCAGCTTGCTGATCTTCCAGACGATGCACCCTTCCACTTCTCCGTGCGTGTTCGCGGTACTGGAGTAGAGTACACCTCTATCTTTGTTGCTCAGAAGGGCAGAAACACCAATAACGGTATTGGCGTATTCTTAGGTGCAACCATCGCTGTTGGCCCATCATCTGGGTGGGTAGCGCCTGGTAATCTTCGGGTGTCTGATAGTGGCCTGATGACATTCCAACTGACAACACCAGTGGACGTCTCTATAAGTATCATTATGGATGGCATTGGCAATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a528b4f95a1fe4ac970817533eb91ebb6909f326d8f83193692d8e9916788c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank