Protein

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Genbank accession
QIN95181.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSVIKGTANGYYDFLNKLQEALTGAGHAWNKSYTGTGNGKITGMNEESGGYVGGEDSIAETFTITATSPTQFSVVGSVSGNIGTTATNVAFNHPKLKFRIVPGSTPFVAGDAFVLNTTPKWELIRRIGTRGSAFRTSDMVNGANMFAAGTAYASKPQNQLPAYGAMQLIKEDKVGQFSVTAWDGSANFSPKALDLQWSDDGAAWTTAQSWTELTFSANEAKFFEVTNPVDPHLYWRVRFNTTFSNLVELRVSGLVFRRTASDMFSLSERAEVLFKAPGLGGLESIYIGCEMYESVTNAIYNLNWYAPRAFDNKKRLRDMVPQSGFVGTPLTNQSFNYWIFVNGQRVIIGCRIGSVYIGGYFGYGNPYEIQVNHQYPMILGGCTDEETTRFDTTNAENRIYCNPGRYTLKAFYPSSGWVRHANLREVGNNSATGSGVEDGKVFPGSMVGDGNTRYLYRDNVDGSLPMFPCVIGGAAPRHMWGEFDGVYWTTGFNNLPEAIITREGFDHLVFQDMFRTTYQDYYAVRMD
Physico‐chemical
properties
protein length:527 AA
molecular weight: 58270,52920 Da
isoelectric point:5,89627
aromaticity:0,13472
hydropathy:-0,29222

Domains

Domains [InterPro]
DC_1928
ATT
1–134
DC_1928 G3DSA:2.60.120.260
DC_0072
STR
229–527
DC_0072
QIN95181.1
1 527
Architecture
ATT
STR
ATT 1-134 | STR 135-527
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN95181.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 69 69 0,4291
Central domain 70 268 200 0,6772
C-terminal 269 527 258 0,9921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-69
Central
70-268
C-terminal
269-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_DLP_3
[NCBI] 		2714184 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95181.1 [NCBI]
Genbank nucleotide accession
MT110073 [NCBI]
CDS location
range 14917 -> 16500
strand +
CDS
ATGAGTGTTATCAAGGGAACGGCCAACGGTTATTACGACTTCCTCAACAAGTTGCAGGAGGCGCTGACTGGCGCTGGCCACGCTTGGAACAAGTCGTACACGGGCACTGGCAACGGCAAGATCACCGGCATGAACGAAGAGTCGGGCGGCTACGTCGGCGGCGAAGATTCCATCGCGGAGACCTTCACGATCACGGCTACCAGCCCGACCCAGTTCTCGGTGGTAGGCTCGGTGTCTGGCAACATCGGCACCACGGCCACGAATGTGGCGTTCAACCACCCGAAGCTGAAGTTCCGTATCGTGCCCGGCTCGACCCCGTTTGTGGCGGGCGACGCCTTCGTGCTGAACACGACTCCGAAGTGGGAGTTGATCCGCCGTATCGGCACCCGGGGCAGCGCCTTCCGGACTTCCGACATGGTGAACGGAGCGAACATGTTCGCGGCGGGCACGGCGTACGCCTCCAAGCCGCAGAACCAGTTGCCCGCGTATGGCGCGATGCAGTTGATCAAGGAGGACAAGGTAGGTCAGTTCTCGGTGACCGCGTGGGATGGCAGTGCCAACTTCAGCCCGAAGGCGTTGGACCTTCAGTGGTCGGATGACGGTGCGGCGTGGACCACTGCCCAGAGCTGGACGGAGCTGACGTTCTCGGCTAACGAGGCGAAGTTCTTCGAAGTCACCAACCCGGTTGACCCCCACCTGTATTGGCGTGTCCGGTTCAACACCACGTTCTCGAATCTGGTTGAGCTGCGCGTGTCTGGGCTGGTGTTCCGCCGCACGGCATCGGATATGTTCTCCCTGTCCGAGCGTGCCGAGGTGCTGTTCAAGGCCCCGGGTCTGGGTGGCTTGGAGTCGATCTATATCGGCTGCGAGATGTATGAGAGCGTGACCAACGCGATCTACAACCTGAACTGGTACGCCCCACGAGCCTTCGACAACAAGAAGCGTCTGCGCGACATGGTGCCGCAGTCCGGGTTTGTGGGTACGCCGCTGACGAACCAGTCGTTCAACTACTGGATTTTTGTCAACGGCCAGCGAGTGATCATCGGTTGCCGTATCGGCTCGGTGTACATCGGCGGCTACTTCGGGTACGGCAACCCGTACGAGATTCAGGTGAACCACCAGTACCCGATGATTTTGGGCGGGTGTACTGACGAAGAAACGACCCGATTTGACACGACCAACGCCGAGAACCGCATCTACTGCAACCCGGGCCGGTACACCCTGAAGGCGTTCTATCCGTCTTCGGGTTGGGTGCGCCACGCCAACCTGCGTGAAGTAGGCAACAACTCGGCGACCGGCTCTGGCGTTGAAGACGGCAAGGTGTTCCCGGGGTCGATGGTGGGCGACGGCAACACCCGATACCTGTACCGCGACAACGTGGACGGCAGTCTGCCGATGTTCCCGTGCGTGATCGGAGGCGCAGCCCCGAGGCACATGTGGGGTGAGTTCGACGGCGTGTACTGGACCACTGGATTCAACAACCTTCCGGAGGCGATAATCACCCGTGAAGGCTTCGACCACCTCGTGTTCCAAGACATGTTCCGGACCACGTACCAAGACTACTACGCAGTGAGGATGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8264b687635d5c9a7b5023ef6008755589cef677d4e87afd13438800775d0333
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel broad-host-range bacteriophage DLP3 specific to Stenotrophomonas maltophilia as a potential therapeutic agent Peters,D.L., Dennis,J.J. and McCutcheon,J.G. 2020 32670234 GenBank