Protein

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Genbank accession
YP_010093295.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAARVTFNNGVQVPYAVNNTNQSGIYPGNGDAATFDTANIDIVSWYGIGFKSSQGSAGRTVVVNTRTGDISTKGGIYATGPVRSNATAPVAANDLTRKDYVDGRINIVTDNANSRVLRSGDTMAGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23542,62720 Da
isoelectric point:6,06997
aromaticity:0,10407
hydropathy:-0,36335

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–193
IPR005601
YP_010093295.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010093295.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,9611
Central domain 34 210 178 0,1578
C-terminal 211 221 10 0,8382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage phi25-307
[NCBI] 		2340715 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010093295.1 [NCBI]
Genbank nucleotide accession
NC_055734 [NCBI]
CDS location
range 135637 -> 136302
strand +
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGCGCCGTTATATGGCATCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCGGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACGTATGCCGCTCGAGTAACATTTAATAATGGTGTGCAAGTACCTTATGCCGTAAATAACACAAATCAAAGTGGTATTTATCCTGGCAATGGCGATGCTGCTACTTTTGATACAGCAAATATTGATATTGTTTCATGGTATGGCATTGGTTTTAAATCATCACAAGGATCTGCAGGTAGAACTGTTGTTGTTAACACTCGTACTGGTGATATCAGCACTAAAGGTGGTATTTATGCAACTGGTCCTGTCCGTTCTAACGCTACTGCTCCGGTTGCAGCAAATGATCTCACAAGAAAAGATTACGTTGATGGACGAATAAATATTGTTACAGATAACGCAAATTCCCGTGTATTGCGTTCTGGCGATACCATGGCTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
126f50a01d0db0461f29c6fd703eda8d154bb4d06c1bd3e510accb154ca7bf0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50