Protein

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Genbank accession
AUR99322.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTTKVNNRMIDGAPVNVLDFGAVGDGVTDDTDALIAALAAGTTVEFGQNKTYLIRTGANILTPNSNTVLNFNGSTVKAMPSNLDSYHMFALEEVENITFNNGFIEGERDEHTGTTGEQGFCIAIRGAKDVVFNSMSLSKSWGDNIYIGIGPTVKYASNITMNACVLDRARRNGLSVVSVDGLAMNSCTISNTAGTAPEFGIDFEPNNNDERLRNISITNLRTVNNANSAVGFAIDKLDGGSTPVSISIDNYQDYGSLFALGFNLALNTKGYIKIRNVLADSQIKNSITFKNWEVTAPQVDIDGVTSTVNHSRTTDIIGDTPVSFQMPNGNIGGNINIKNVEQYFTSGQSGTGYNVAFDGSTEFRTLSLDGIEGQILNQQALSEGSKIIDDEFLGVTNVLDFPFVTQKFVNLKNTTAYGNTQLQLQAFRDTDTVYQMTCVSETGSDALTINPPGGESLYPLGIDDLDSGKITLNELGKSILIKRQGGRWVVTSKNY
Physico‐chemical
properties
protein length:495 AA
molecular weight: 53303,74480 Da
isoelectric point:4,58898
aromaticity:0,07879
hydropathy:-0,19939

Domains

Domains [InterPro]
IPR012334
STR
3–387
IPR012334
IPR011050
STR
15–343
IPR011050
AUR99322.1
1 495
Architecture
STR
STR 3-387 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99322.1
1 495
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9458
Central domain 30 395 367 0,9855
C-terminal 396 495 99 0,9684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-395
C-terminal
396-495

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.264.O._10N.286.51.F2
[NCBI] 		1881447 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99322.1 [NCBI]
Genbank nucleotide accession
MG592629.1 [NCBI]
CDS location
range 8439 -> 9926
strand +
CDS
ATGACGACTAAAGTTAATAATCGAATGATTGATGGAGCTCCTGTCAACGTTCTAGATTTTGGAGCTGTAGGCGACGGGGTTACTGACGACACTGACGCCCTTATCGCAGCATTGGCTGCTGGGACTACTGTAGAATTTGGTCAAAATAAAACCTACTTGATTCGCACAGGGGCTAATATTCTCACCCCTAATTCTAACACAGTGTTGAACTTTAACGGTTCTACTGTTAAAGCGATGCCTAGTAACCTTGATTCGTATCATATGTTCGCTCTCGAAGAAGTTGAGAATATTACCTTTAATAACGGTTTTATTGAAGGAGAAAGGGATGAACATACAGGCACCACTGGAGAACAGGGTTTCTGTATTGCGATCAGAGGTGCTAAAGACGTTGTGTTTAACAGCATGTCTCTAAGTAAGTCTTGGGGGGATAATATCTATATAGGTATAGGCCCAACTGTTAAGTATGCCTCTAATATTACAATGAACGCTTGTGTGCTCGATAGAGCGAGACGGAACGGCCTAAGTGTGGTATCTGTGGATGGCTTGGCTATGAACAGTTGCACAATATCGAATACAGCAGGAACAGCTCCTGAGTTTGGTATTGACTTCGAACCTAATAATAACGATGAACGTTTACGTAACATCTCTATCACAAATCTAAGAACGGTTAATAACGCTAACTCGGCAGTAGGTTTTGCTATTGACAAGTTGGACGGAGGTTCTACTCCTGTATCTATATCTATAGATAATTATCAAGACTATGGTTCGTTATTTGCGCTAGGTTTTAACTTGGCTCTAAATACGAAGGGTTATATCAAGATTCGCAATGTTCTTGCAGACTCTCAGATTAAGAATTCAATTACATTCAAGAACTGGGAAGTGACCGCTCCTCAAGTTGACATTGATGGTGTTACTTCAACTGTTAACCATTCCCGTACTACTGATATTATCGGAGATACTCCTGTTAGTTTCCAAATGCCTAACGGGAATATCGGAGGCAATATAAATATTAAGAACGTAGAACAATACTTCACATCAGGTCAGTCAGGAACTGGTTATAATGTAGCATTCGATGGATCAACAGAATTTCGAACACTGAGCCTTGATGGTATTGAAGGTCAGATCTTGAATCAACAGGCATTATCTGAAGGTTCAAAGATTATTGACGATGAGTTCCTTGGTGTTACTAATGTCCTAGACTTCCCGTTTGTCACACAGAAGTTTGTTAATCTGAAAAATACAACAGCTTATGGCAACACACAATTACAACTTCAAGCATTTCGAGACACCGATACGGTGTATCAGATGACATGCGTAAGTGAGACAGGTTCGGACGCGTTAACTATTAACCCTCCCGGAGGAGAATCTCTTTACCCTCTAGGCATTGACGATCTTGATTCAGGAAAGATCACTCTTAATGAATTAGGTAAATCGATTTTAATTAAAAGACAAGGTGGCCGTTGGGTCGTTACGTCGAAAAACTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e62ca9606c6d3ccbd3bec22b96fe216d384d18d59f926778374094c11e512055
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank