Protein

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Genbank accession
APD21859.1 [GenBank]
Protein name
PblB
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MDISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRASGIRQEILNATKDKADKTLVTAEAGKLREELTSLSVGENLFVNSDFKNLRDNGQRYTANGKTYQNMIAPYWYNPYNAGIPNAQNIQHGYFDTETFSDTVFAFNESDGSRHWKALSTDFKIGVISAGEYYFSADLYATDLGTHIKFGFYYHNSTGKLNFYAGRTKIEVTEKGRWTRLGIDLKVNDDIDLTKKVQFYIYGYNFASNSILYLKKPKVSKGRLKSDWSPALEDTEGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNISNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNGTNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWVVENINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTADKVRFDAAFIRKMIANDAFIDQLTSKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA
Physico‐chemical
properties
protein length:1072 AA
molecular weight: 119877,08930 Da
isoelectric point:8,81355
aromaticity:0,09701
hydropathy:-0,59618

Domains

Domains [InterPro]
DC_1421
STR
2–341
DC_1421 DC_0720
IPR008979
STR
525–679
IPR008979 IPR030392
G3DSA:2.60.120.260
STR
529–679
G3DSA:2.60.120.260 IPR030392
DC_0976
RBD
1028–1072
DC_0976
APD21859.1
1 1072
Architecture
STR
STR
RBD
STR 2-341 | STR 373-1040 | RBD 1041-1072
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP12
[NCBI] 		1916153 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD21859.1 [NCBI]
Genbank nucleotide accession
KY065454 [NCBI]
CDS location
range 28839 -> 32057
strand +
CDS
GTGGATATCAGCTCACTCAACGTGACTGCTGAAAATATTAGGCAGTCGGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCAAGCGGAATCCGTCAGGAAATCCTGAATGCAACCAAGGACAAGGCTGACAAGACCTTGGTAACAGCGGAGGCTGGGAAGTTGAGAGAGGAGCTGACAAGTCTGTCGGTTGGCGAGAATCTGTTTGTAAACTCAGATTTTAAAAATCTGAGGGATAACGGACAGCGTTATACAGCTAACGGCAAGACCTATCAAAACATGATTGCGCCTTACTGGTACAATCCGTACAATGCTGGTATTCCAAATGCTCAAAATATCCAGCATGGGTATTTTGACACGGAAACGTTTAGTGATACTGTCTTTGCCTTTAACGAGAGCGACGGCTCCCGACACTGGAAAGCATTGTCAACTGATTTTAAAATCGGAGTCATCTCAGCTGGAGAGTATTACTTTTCAGCTGATTTGTATGCGACAGATTTAGGCACTCATATCAAATTTGGATTTTACTATCACAACTCGACTGGCAAACTCAATTTTTACGCAGGTCGAACAAAAATTGAAGTTACTGAAAAAGGCCGTTGGACTAGGCTAGGAATTGACTTAAAGGTCAATGATGACATTGACCTGACAAAAAAAGTCCAATTTTACATTTACGGCTATAATTTTGCTAGCAACTCAATTTTGTACCTTAAAAAGCCTAAAGTCTCGAAAGGTCGCTTAAAAAGCGATTGGAGCCCAGCTCTGGAAGACACCGAAGGCCTCATCACTGAGGCTAAGGCAACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGACTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAGAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATATTTCAAATCGGATAAACAGTAATAAACAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAATATAGTGTAAGCGGCCCTAACCTCATTAAGAATAGTGATTTTAAAAATGGTACGAATGAATGGGGCTCAACTCAAAATTTAGGAAGATTGGTTAAGCATAGCTTTTATCACAACGGGCAGAAAGACCTTATGCGTTTAAGTAATGCAACTAAAAACGAAAACTTTTTGTATAGTCACCGTTTTAATCTTGAACGAAATACTGACTATGTACTGAATTTTAGAGGATTTAACAACAGTGCTCTCGCAAGCTATGATGTTTATATTTTGGGACGAAGAGCAGGCGAGAGCGATGGATTCACAATCGTTAAGAAAGTTGTTAGCAGCAAGAAACTATCTACCTCTAGATGCGAAGATGTCTCAGTAACTTTTAATTCCGGAGAAATGGATAATGCTTACATTCGTTTTGATAACAATGGCTCATCATCAGGAACAGCTGATTTGTATATTACAGAAGTTGACTTGTACAAAGGTTATAAACCTAGAACATGGCAACCACATCCAGAAGATGCAGTCGCAGATGCGAATAAGAAGCTTGAAGCCACGCAAACAAAAATGACTCAACTAGCTGGCTCATGGGTAGTTGAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAAGCGGTCACGGCTGATAAAGTGAGATTTGATGCTGCGTTTATTAGAAAAATGATTGCAAATGACGCTTTTATTGACCAACTGACATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGCCGAATCGGTGGATTTACACTTGGTCAATTTGATCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGCATGGGGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGACAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACACGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTACATATCGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
df0811b281c847e8d75c84806c0ff19cf9eb6c3166d7a7c2f67a1f383fed3d06
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50