Protein

UniProt accession
Q1RNC8_9CAUD [UniProt]
Protein name
Receptor binding protein
RBP type
TSP

evidence: DepoScope

probability: 0,9999

Protein sequence
MTINNFTFFSPNGTEFPVGSNNDAKLYMMLTGMDYGTIRRKDWKSPLNTALNVQYTNTSIIAGGRYFELLNETVALKGNAVNYIHANIDLTQTANPVSLSAETSNNSNRVDINNGSGVLKVCFDIVTTSGTGVISTKPIVQTSIFDSVNSNNISVNDISLTGSLNVPTQKWTVQTSNGLILQFTKKNNDLVIVQFAGEVTLTASGKIMGGTWVDFPYRPSVTQSLVGHLAGSGNSFHVDINPDGSIIWWGAYVGYDAVTPRGNASYFIK
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29098,31910 Da
isoelectric point:6,27397
aromaticity:0,09665
hydropathy:-0,08439

Domains

Domains [InterPro]
IPR048780
2–139
IPR048780 IPR008982
IPR015027
169–269
IPR015027
Q1RNC8_9CAUD
1 269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage Q39
[NCBI] 		287434 Uroviricota > Caudoviricetes > Skunavirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAT81507.1 [NCBI]
Genbank nucleotide accession
AY576307 [NCBI]
CDS location
range 1 -> 810
strand +
CDS
ATGACAATTAACAACTTCACATTTTTCAGTCCAAATGGAACAGAGTTTCCAGTCGGTTCTAATAATGACGCAAAGTTATACATGATGTTGACTGGAATGGACTATGGAACAATTAGGCGCAAAGACTGGAAAAGTCCGTTAAATACAGCTCTTAATGTACAATACACTAACACATCAATCATTGCAGGCGGTAGGTATTTTGAACTATTGAATGAAACTGTTGCCTTAAAAGGTAATGCAGTCAATTATATCCATGCAAACATTGACTTAACACAAACAGCAAACCCTGTAAGTTTATCAGCAGAAACATCAAATAATAGTAATCGTGTTGATATAAACAACGGTTCTGGCGTTTTGAAAGTTTGTTTTGATATTGTTACGACTTCAGGAACTGGTGTAATAAGCACTAAACCAATTGTTCAGACTAGTATTTTTGATAGTGTCAATAGCAACAATATTTCTGTAAATGATATATCACTTACAGGCTCACTCAATGTTCCAACTCAAAAGTGGACGGTTCAGACTTCAAATGGTTTGATATTGCAATTTACTAAAAAGAACAATGATTTAGTAATTGTCCAATTCGCCGGAGAGGTAACACTTACAGCAAGTGGTAAAATTATGGGTGGAACATGGGTAGATTTTCCGTACCGCCCTTCTGTTACTCAAAGTCTTGTTGGTCATCTTGCTGGGTCAGGTAACAGTTTCCATGTTGACATAAACCCAGATGGTAGTATTATTTGGTGGGGAGCATACGTTGGTTATGACGCTGTGACGCCACGTGGTAACGCAAGTTACTTTATAAAATAA

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0007155 cell adhesion Biological Process IEA:InterPro (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID: 106153

Method: ESMFold

Resolution: 0,7759

Evidence: 0,8213

Literature

Title Authors Date PMID Source
Receptor-binding protein of Lactococcus lactis phages: identification and characterization of the saccharide receptor-binding site. Tremblay DM, Tegoni M, Spinelli S, Campanacci V, Blangy S, Huyghe C, Desmyter A, Labrie S, Moineau S, Cambillau C 2006-04 16547026 PubMed
Receptor-Binding Protein of <i>Lactococcus lactis</i> Phages: Identification and Characterization of the Saccharide Receptor-Binding Site Denise M. Tremblay, Mariella Tegoni, Silvia Spinelli, Valérie Campanacci, Stéphanie Blangy, Céline Huyghe, Aline Desmyter, Steve Labrie, Sylvain Moineau, Christian Cambillau 2006-04 10.1128/JB.188.7.2400-2410.2006 DOI