Protein

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Genbank accession
QQV88673.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVDMSQIFSKLAMPSPEFLRKDRFEPVANGKIYVGKTDTDPLNPANQIPVYAQQEDGSLVQVSQPIRINASGYPVYNGKAAKFITHTAASMKVMDVSDVEMWYWPNLFEYDSSQMWAVLASQFGADFVGTPVGTIQEQLNGYVTPWNFIGKAPYANEHEAIQAMLDYASANNKLVWCVGYTLRTNGILTGSNLKIVGGRWVLSGNDPRFDTCELVGGRWEGRSIWTKNTTIRECWLEKCRVRHDSGEVRILDSRFNGEVAGSNVTAIVIQGSQPGQVNPEGSIEVDGVVFSNGLNGILHQGGNANMRYGIYRNLAFFDMKGDGIELNVVNSTYNEGLVIENILLNNINATLSGSNWGIGIGIAGKGPYAWDADESMYCHDFTIRNVMARGVRQCVHVEVGRDFTIENCRLYPDVTKSNGTGLTTAGVYIAGSKRFTVDGISGEPVGSASVADTDIPLVDIRWGTRADDVRYIPASRDYTLRNVNTKRGRVSLSCDAYPGVGTTPATPNRVRVNDVNCYTFRAMGVATQLDLSDVTAVVWDCTGDLAAGGVDGAASSGQTIATKSVLNMVNCTAYDPNGFGGQSYKRCAYSHVSVVGGNVDANQRVTIIGRLGPMLGNVGKIFYPQIYPTATGHSYYDYFPTGREFDVGDMVFIPVWDADHNNITGTRYYIVTKAGAFIPDNDNNNIRAAAVGDKTLIQQKTPSGTSTGSPWVYSNQFSPGTRITIPGAGAGGAALNTVITRSPYQEPPGDTSALIKMDIADPIVTAVPAGTRIRATVPLETLPPNPPAP
Physico‐chemical
properties
protein length:790 AA
molecular weight: 85404,05470 Da
isoelectric point:5,54541
aromaticity:0,09114
hydropathy:-0,19987

Domains

Domains [InterPro]
IPR036730
ATT
8–113
IPR036730 DC_0354 IPR023882 DC_0045
IPR009093
ATT
12–115
IPR009093 IPR011050
IPR036730
ATT
12–110
IPR036730
IPR036730
ATT
20–113
IPR036730
QQV88673.1
1 790
Architecture
ATT
ATT
STR
RBD
ATT 8-115 | ATT 127-185 | STR 186-445 | RBD 461-786 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV88673.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9934
Central domain 155 637 484 0,9933
C-terminal 638 790 152 0,7666
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-637
C-terminal
638-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage Kc166B
[NCBI] 		2801383 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV88673.1 [NCBI]
Genbank nucleotide accession
MW258711.1 [NCBI]
CDS location
range 17440 -> 19812
strand -
CDS
ATGGCCGTAGACATGAGCCAGATTTTCAGCAAGCTGGCAATGCCCAGCCCTGAATTTCTGCGTAAGGATCGTTTTGAGCCGGTAGCCAACGGCAAGATTTACGTTGGCAAGACCGACACGGATCCGCTGAACCCGGCGAACCAGATCCCGGTATATGCACAGCAGGAGGACGGCAGTTTAGTGCAGGTGAGCCAACCGATCAGGATCAACGCCAGCGGCTACCCGGTGTATAACGGCAAGGCTGCGAAATTCATCACGCACACCGCTGCCAGCATGAAAGTGATGGACGTTAGCGACGTCGAAATGTGGTACTGGCCTAACCTTTTTGAGTATGACAGTTCGCAGATGTGGGCCGTGCTGGCTTCACAGTTCGGCGCTGATTTCGTCGGCACGCCAGTGGGCACCATTCAGGAGCAGCTAAACGGCTACGTGACGCCGTGGAATTTCATCGGCAAAGCGCCCTATGCGAATGAGCATGAGGCTATCCAGGCAATGCTTGATTACGCCAGCGCCAACAATAAATTGGTCTGGTGCGTCGGTTACACCCTGCGCACTAACGGCATTCTGACCGGTTCGAATCTCAAGATTGTGGGCGGCCGCTGGGTGCTTTCTGGCAACGATCCGCGTTTCGACACCTGCGAGTTAGTCGGCGGCCGTTGGGAAGGTCGATCCATCTGGACGAAAAACACCACGATCCGCGAGTGCTGGTTAGAAAAATGCCGCGTGCGCCACGACTCTGGCGAAGTGCGGATCCTTGACTCCCGTTTCAACGGCGAGGTGGCCGGTAGTAACGTTACGGCGATCGTTATTCAGGGTAGCCAGCCCGGGCAGGTTAATCCCGAAGGTTCGATCGAGGTTGACGGCGTTGTGTTCTCTAACGGCCTGAATGGCATCTTGCACCAGGGCGGCAATGCCAACATGCGCTATGGCATTTATCGCAACCTTGCATTTTTCGACATGAAAGGCGACGGCATCGAACTGAACGTTGTCAACAGCACCTATAACGAAGGGCTGGTGATCGAAAACATCCTACTGAACAACATCAACGCCACGCTATCCGGTTCGAATTGGGGCATTGGCATCGGTATTGCCGGGAAAGGCCCGTACGCCTGGGACGCTGACGAGTCGATGTATTGCCACGACTTCACGATCCGCAACGTTATGGCGCGCGGCGTTCGCCAGTGCGTTCACGTCGAAGTTGGCCGCGATTTCACGATCGAGAACTGCCGACTTTACCCGGATGTGACCAAATCGAACGGCACCGGCCTGACGACCGCGGGCGTTTATATTGCCGGTTCGAAGCGCTTCACCGTGGACGGGATCAGCGGTGAGCCAGTAGGTTCCGCGTCGGTTGCCGATACCGATATCCCGCTGGTCGATATCCGCTGGGGTACGCGTGCCGACGACGTGCGATACATCCCGGCCAGCCGCGATTACACCCTGCGCAACGTCAACACGAAGCGCGGCCGCGTGTCGTTGTCGTGTGACGCTTACCCGGGCGTTGGCACCACGCCAGCCACCCCCAACCGCGTGCGCGTCAATGATGTAAACTGCTACACCTTCCGCGCTATGGGCGTCGCCACGCAACTGGATCTTTCCGACGTCACCGCAGTGGTGTGGGATTGTACCGGCGACCTGGCAGCGGGTGGCGTTGACGGTGCGGCATCGTCCGGCCAGACCATCGCCACCAAGTCGGTGCTGAACATGGTCAACTGTACGGCATACGATCCGAACGGTTTCGGCGGGCAGTCTTATAAGCGCTGCGCTTATTCGCATGTTTCCGTTGTGGGGGGAAATGTGGACGCCAACCAGCGTGTAACCATCATCGGCCGTTTGGGGCCAATGCTGGGGAACGTCGGCAAGATCTTTTATCCGCAGATTTACCCGACGGCCACCGGTCACAGCTATTACGATTATTTCCCGACCGGGCGCGAATTTGACGTTGGCGATATGGTGTTTATCCCGGTGTGGGATGCCGACCATAACAACATTACGGGCACGCGTTACTACATCGTGACCAAAGCGGGGGCGTTTATCCCGGACAACGACAACAACAACATCCGCGCCGCTGCCGTGGGTGACAAGACGCTGATCCAGCAAAAAACGCCGTCGGGCACGTCTACCGGTTCGCCGTGGGTGTACAGCAACCAGTTTAGCCCTGGCACCCGGATCACGATTCCGGGCGCTGGTGCCGGCGGTGCTGCGCTTAACACCGTGATCACCCGCTCGCCTTACCAGGAACCGCCAGGCGATACCAGCGCGCTGATCAAGATGGACATTGCTGATCCTATCGTCACCGCAGTGCCAGCAGGCACAAGGATCAGGGCAACCGTACCGCTTGAAACGCTGCCGCCTAACCCGCCAGCACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c8d0be0de2f60adb90d7a5eb00baa900486eea53321dbbdceba0aadae22e5bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank