Protein

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Genbank accession
AGF88391.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARHFGVKQSEIVYFSVGVDLGGYKVIYDKETQRAYSLPAGIAPGTTAISLSTAAVLVHSAGSVDLGALAVSREEYVTLPGSFDSGSTLNVKNELLTYTDGKYRWDGAFPKTVVAGSTPESTGGIGIGAWISVGDAAFRGEANKKFKYSVKLSDYSTLQEAATAAVDGLLIDINYNFTDGESVDFGGKVLTINCKAKFIGDGALIFNNMGPGSVINQPFMESKTTPWVIFPWDADGKWITDAALVAATLKQSKIEGYQPGVNDWVKFPGLEALLPQNVKDQHIAATLDIRSASRVEIRNAGGLMAAYLFRSCHHCKVIDSDSIIGGKDGIITFENLSGDWGLGNYVIGGRVHYGSGSGVQFLRNNGGESHNGGVIGVTSWRAGESGFKTYQGSVGGGTARNYNLQFRNSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGSGGYVSNVTVQDCAGAGMLAHTYNRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPSNGLVISAPNSTISGLVGNVPPDKILVGNLLDPVLGQSRVIGFNSDTAELALRINKLSATLDSGALRSHLNGSAGSGSAWTELTALSGSTPNAVSLKVNRGDYKTTELPISGTVLPDEGVLDINTMSLYLDAGALWALIRLPDGSKTRMKLSA
Physico‐chemical
properties
protein length:709 AA
molecular weight: 74773,35790 Da
isoelectric point:5,39228
aromaticity:0,08039
hydropathy:-0,03681

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012332
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
91–156
IPR040775 IPR015331
AGF88391.1
1 709
Architecture
ATT
STR
ATT 1-152 | STR 153-709
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGF88391.1
1 709
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,9889
Central domain 179 600 423 0,9847
C-terminal 601 709 108 0,8691
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-600
C-terminal
601-709

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage FSL SP-076
[NCBI] 		1173762 Uroviricota > Caudoviricetes > Schitoviridae > Ithacavirus > Ithacavirus SP076
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enterica subsp. enterica serovar Dublin
[NCBI] 		98360 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
b6bbfe0f487efd7788003043ab9f69dea4ba7a3bec69e632557802b4081d6be7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50