Protein

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Genbank accession
XBM94923.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVYTPIPKGTQNWDEPVNDAFTAQDTRITDLESRTQGQTYYFLVAASNAPDQVKAKADYVCDGLADQIEIQSAVDAAFAQGGGIVQLTSGFFSTSFPITLHPAVTLRGAHGDQIFNPDQLTSGSRIAPDPSFTGGAVIVLLGQTAGGYGNKSAEQRIFHLTILGDSAPANVNGIQGSDYVHGVCLQDVAIVRPTGKGIYTFTENGAQPFSWTLHRVLVDNSVGVGIHLINHTDATMVDVISIGAGESNYVLSNMPNSRLIGCRAEWSEAHGYKIEGDWGTGQGSGGMLMSGCSTDRNGQNGIDITTTGNAPINIDGIITRRDGRNGGLGGGGYAGISVTNATNPIIISNHTNYPGVDDGGAGVNSPDYGLNAAGSTYVFLSSGFLHAELDGFHDGGGNAQLRRGPNVGERVGSTATPADAFSEAWTAYGNMDVTGYFVANSGQSNGQWSIFSGAPDALRLGSGGGGLSISEGGAARMGESTLTAGTVTVANASVAANDRIILSRQTPDGTIGHLSVAKNPGVGFDINSSDAGDTSTVAWVILRPA
Physico‐chemical
properties
protein length:545 AA
molecular weight: 56270,26890 Da
isoelectric point:4,75239
aromaticity:0,07339
hydropathy:-0,14532

Domains

Domains [InterPro]
DC_1206
ATT
1–45
DC_1206 IPR011050 IPR056204
IPR012334
STR
54–382
IPR012334
DC_0770
STR
216–475
DC_0770
XBM94923.1
1 545
Architecture
ATT
STR
ENZ
ATT 1-45 | STR 46-475 | ENZ 476-542 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XBM94923.1
1 545
Domain Start End Length (AA) Confidence
N-terminal 1 67 67 0,9796
Central domain 68 432 366 0,9862
C-terminal 433 545 112 0,9210
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-67
Central
68-432
C-terminal
433-545

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Abafar
[NCBI] 		3158855 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces albidoflavus
[NCBI] 		1886 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBM94923.1 [NCBI]
Genbank nucleotide accession
PP750865 [NCBI]
CDS location
range 19340 -> 20977
strand +
CDS
ATGGTTTACACCCCGATCCCAAAGGGCACCCAGAACTGGGATGAGCCCGTCAATGACGCCTTCACCGCGCAGGATACGAGGATCACCGACCTGGAGTCCCGCACTCAGGGACAGACCTACTACTTCCTGGTCGCAGCATCCAACGCTCCAGACCAGGTGAAGGCCAAGGCCGACTACGTATGCGATGGACTCGCCGATCAGATCGAGATCCAGAGCGCAGTGGATGCAGCATTCGCTCAGGGTGGCGGCATCGTTCAGCTCACCTCTGGGTTCTTCAGCACCTCGTTCCCCATCACGCTTCACCCAGCCGTGACGCTCAGGGGAGCGCACGGCGATCAGATCTTCAACCCGGACCAGCTTACCTCCGGCTCTCGCATTGCTCCCGACCCGTCGTTCACGGGTGGGGCGGTCATCGTCCTGCTTGGACAGACTGCTGGTGGATATGGGAACAAGTCCGCCGAGCAGAGGATCTTCCATCTGACCATCCTGGGTGACTCTGCTCCAGCGAATGTCAACGGAATCCAGGGCAGCGACTACGTCCACGGCGTCTGTCTACAGGATGTGGCGATCGTCAGGCCGACTGGCAAGGGAATCTACACCTTCACCGAGAACGGCGCTCAGCCGTTCTCTTGGACGCTCCACCGAGTCCTAGTGGACAACTCGGTCGGAGTAGGAATCCACCTGATCAACCACACTGACGCCACCATGGTGGATGTCATCTCCATCGGGGCAGGAGAGTCCAACTATGTTCTCTCCAACATGCCCAACAGCCGACTGATCGGCTGCCGTGCAGAGTGGTCCGAGGCTCACGGCTACAAGATCGAGGGAGACTGGGGAACTGGTCAGGGCTCTGGCGGAATGCTGATGTCTGGCTGCTCCACCGATCGCAACGGTCAGAACGGCATCGACATTACCACCACTGGCAACGCCCCAATCAACATCGATGGCATCATCACCCGTCGTGACGGGAGGAACGGTGGACTCGGTGGAGGCGGATACGCAGGTATCAGCGTCACCAACGCAACCAACCCGATCATCATCTCCAACCACACCAACTACCCAGGCGTGGATGATGGTGGGGCTGGAGTCAACAGCCCAGACTACGGACTGAATGCCGCTGGCTCTACGTATGTGTTCCTGTCCTCTGGCTTCCTGCACGCCGAGCTTGACGGATTCCATGATGGAGGCGGGAACGCCCAGCTTCGTCGCGGACCCAACGTCGGTGAGCGAGTGGGGTCTACCGCTACTCCGGCTGACGCCTTCTCCGAGGCGTGGACAGCGTATGGAAACATGGATGTAACTGGCTACTTTGTGGCCAACTCTGGCCAGTCGAATGGTCAGTGGAGCATCTTCAGCGGAGCGCCTGACGCGCTCCGTCTGGGTTCAGGCGGAGGCGGACTATCCATCTCTGAGGGTGGCGCAGCCCGCATGGGTGAGTCCACCCTGACTGCCGGAACGGTGACCGTGGCCAATGCCTCGGTTGCTGCGAATGACAGGATCATCCTGTCAAGGCAGACTCCTGACGGAACCATTGGTCACCTGTCTGTGGCCAAGAATCCTGGCGTAGGGTTCGACATCAACAGCTCTGACGCCGGAGACACATCAACTGTCGCATGGGTCATCCTGCGACCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29be3ecd783db143e346dbed5ce151244af7f009c99f2c584f4253607b1c4b8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the new Streptomyces phages Kamino, Geonosis, Abafar and Scarif infecting a broad range of host species Rackow,B., Rolland,C., Mohnen,I., Wittmann,J., Muesken,M., Overmann,J. and Frunzke,J. 2025 40586787 GenBank